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OPENSEQ.org
L05 - L07
UniProt: Q5SHQ0 - Q8VVE2
Length: 307
Sequences: 1336
Seq/Len: 4.41
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01GL 2j03GLContact Map
4kix4kixF6 4kizF 4kj1F 4kj3FContact Map
3i8f3i8fG 3i8iGIJContact Map
3sfs3sgfFLKMJContact Map
2zjq2zjqD5Contact Map
4kd84kd9Ge 4kdbGeContact Map
4kcy4kczGe 4kd2GeContact Map
3uoq3uosFKLMJContact Map
4kbt4kbuGe 4kbwGeContact Map
4kdg4kdhGe 4kdkGeContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_K 10_E 0.75 0.00
105_K 5_I 0.71 0.00
169_A 111_I 0.66 0.00
77_I 36_A 0.64 0.00
82_L 79_R 0.63 0.00
132_N 27_L 0.62 0.00
8_K 70_K 0.61 0.00
149_V 27_L 0.60 0.00
34_L 103_V 0.59 0.00
155_M 9_K 0.59 0.00
9_R 12_L 0.59 0.00
107_L 47_A 0.59 0.00
15_V 10_E 0.57 0.00
120_L 91_D 0.57 0.00
153_R 9_K 0.56 0.00
109_V 79_R 0.56 0.00
107_L 91_D 0.56 0.00
74_K 13_S 0.56 0.00
37_V 54_A 0.56 0.00
27_N 70_K 0.55 0.00
41_Q 75_I 0.54 0.00
16_R 81_I 0.54 0.00
91_R 83_G 0.54 0.00
86_M 72_L 0.54 0.00
139_L 23_L 0.54 0.00
54_E 73_E 0.54 0.00
181_R 15_A 0.52 0.00
24_G 50_A 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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