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OPENSEQ.org
L05 - S18
UniProt: Q5SHQ0 - Q5SLQ0
Length: 270
Sequences: 1019
Seq/Len: 4.14
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dG 3v2eR 3v2fGContact Map
2j002j00R 2j01G 2j02R 2j03GContact Map
4juw4juwR 4juxGContact Map
4kix4kixF 4kiyR 4kizF 4kj0R 4kj1F 4kj2R 4kj3F 4kj4RContact Map
4kj54kj5F 4kj6R 4kj7F 4kj8R 4kj9F 4kjaR 4kjbF 4kjcRContact Map
3ohc3ohcR 3ohdR 3ohjG 3ohkGContact Map
3knh3knhR 3kniG 3knjR 3knkGContact Map
3uz63uz6U 3uz7U 3uz8G 3uz9GContact Map
3oge3ogeR 3ogyR 3oh5G 3oh7GContact Map
3uyd3uydU 3uyeG 3uyfU 3uygGContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
132_N 45_S 0.78 0.00
20_I 70_I 0.78 0.00
105_K 75_I 0.77 0.00
76_S 27_G 0.77 0.00
181_R 82_T 0.77 0.00
177_G 43_F 0.75 0.00
140_I 51_L 0.74 0.00
156_D 42_R 0.73 0.00
104_E 38_E 0.71 0.00
133_L 24_A 0.70 0.00
144_I 70_I 0.70 0.00
118_R 37_V 0.69 0.00
153_R 45_S 0.68 0.00
77_I 43_F 0.67 0.00
68_P 55_R 0.66 0.00
34_L 21_K 0.66 0.00
146_Y 52_P 0.66 0.00
169_A 18_R 0.66 0.00
59_E 38_E 0.66 0.00
81_K 76_L 0.65 0.00
88_I 75_I 0.65 0.00
6_A 38_E 0.65 0.00
100_W 52_P 0.64 0.00
18_E 70_I 0.64 0.00
76_S 82_T 0.63 0.00
23_F 41_K 0.61 0.00
169_A 84_K 0.61 0.00
96_R 55_R 0.61 0.00
139_L 52_P 0.61 0.00
53_L 21_K 0.61 0.00
52_I 23_K 0.61 0.00
140_I 72_R 0.60 0.00
10_K 79_L 0.60 0.00
64_T 42_R 0.60 0.00
96_R 51_L 0.59 0.00
40_N 19_K 0.58 0.00
118_R 36_N 0.58 0.00
21_R 48_G 0.58 0.00
64_T 18_R 0.58 0.00
78_S 78_L 0.57 0.00
53_L 20_A 0.57 0.00
64_T 20_A 0.57 0.00
8_K 33_D 0.57 0.00
159_V 39_V 0.57 0.00
57_A 56_T 0.57 0.00
103_L 78_L 0.56 0.00
123_N 41_K 0.56 0.00
22_R 70_I 0.56 0.00
115_R 36_N 0.56 0.00
82_L 43_F 0.56 0.00
67_K 46_E 0.56 0.00
148_M 44_L 0.56 0.00
160_V 53_R 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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