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OPENSEQ.org
L05 - L11
UniProt: Q5SHQ0 - Q5SLP6
Length: 329
Sequences: 1351
Seq/Len: 4.25
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoDIContact Map
1vq81vq8DIContact Map
1vqp1vqpDIContact Map
1vqm1vqmDIContact Map
1vql1vqlDIContact Map
1vqk1vqkDIContact Map
1yhq1yhqDIContact Map
1s721s72DIContact Map
1vq91vq9DIContact Map
1vqn1vqnDIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
82_L 51_A 0.79 0.00
162_T 8_V 0.78 0.00
74_K 139_V 0.73 0.00
38_V 105_L 0.72 0.00
16_R 113_P 0.70 0.00
120_L 16_K 0.67 0.00
115_R 15_G 0.67 0.00
16_R 98_R 0.65 0.00
118_R 84_L 0.64 0.00
86_M 112_M 0.62 0.00
120_L 121_E 0.62 0.00
178_F 44_A 0.62 0.00
76_S 83_G 0.62 0.00
159_V 126_M 0.61 0.00
115_R 75_S 0.60 0.00
121_N 64_S 0.60 0.00
150_D 40_A 0.60 0.00
53_L 68_V 0.60 0.00
151_A 86_K 0.59 0.00
157_I 68_V 0.59 0.00
120_L 49_G 0.59 0.00
169_A 126_M 0.58 0.00
40_N 134_M 0.58 0.00
12_Y 5_V 0.58 0.00
182_K 86_K 0.58 0.00
33_R 140_G 0.57 0.00
19_L 47_N 0.57 0.00
16_R 90_K 0.57 0.00
73_A 97_G 0.57 0.00
118_R 8_V 0.57 0.00
149_V 63_R 0.56 0.00
150_D 30_H 0.56 0.00
55_K 44_A 0.56 0.00
182_K 41_F 0.56 0.00
13_E 86_K 0.56 0.00
177_G 77_L 0.55 0.00
41_Q 43_A 0.55 0.00
140_I 76_Y 0.55 0.00
156_D 76_Y 0.55 0.00
13_E 7_V 0.54 0.00
17_P 12_L 0.54 0.00
132_N 12_L 0.54 0.00
172_L 57_I 0.54 0.00
96_R 4_V 0.54 0.00
131_Y 81_A 0.54 0.00
139_L 49_G 0.54 0.00
164_E 4_V 0.54 0.00
21_R 109_K 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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