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OPENSEQ.org
L05 - L35
UniProt: Q5SHQ0 - Q5SKU1
Length: 247
Sequences: 1070
Seq/Len: 4.42
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dG8 3v2fG8Contact Map
2j002j01G8 2j03G8Contact Map
4juw4juxG8Contact Map
4kix4kixF3 4kizF3 4kj1F3 4kj3F3Contact Map
4kj54kj5F3 4kj7F3 4kj9F3 4kjbF3Contact Map
2zjr2zjrD3Contact Map
4btc4btdG8Contact Map
3uyd3uyeG8 3uygG8Contact Map
4gd13r8sF3 3r8tF3Contact Map
3knh3kniG8 3knkG8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
169_A 7_H 0.92 0.01
182_K 15_K 0.88 0.01
108_N 9_G 0.84 0.01
77_I 46_R 0.83 0.01
156_D 17_T 0.79 0.01
74_K 35_Q 0.78 0.01
146_Y 45_G 0.73 0.00
165_T 55_A 0.71 0.00
135_L 48_F 0.70 0.00
18_E 8_K 0.69 0.00
81_K 33_N 0.68 0.00
96_R 8_K 0.67 0.00
15_V 62_L 0.67 0.00
182_K 34_W 0.66 0.00
156_D 54_E 0.66 0.00
76_S 57_R 0.65 0.00
49_D 7_H 0.64 0.00
26_Q 9_G 0.64 0.00
136_R 63_P 0.63 0.00
162_T 55_A 0.62 0.00
27_N 54_E 0.62 0.00
49_D 8_K 0.62 0.00
174_E 6_T 0.61 0.00
20_I 53_P 0.60 0.00
37_V 55_A 0.60 0.00
164_E 51_A 0.60 0.00
88_I 58_I 0.59 0.00
71_T 45_G 0.59 0.00
29_W 23_V 0.59 0.00
162_T 63_P 0.59 0.00
169_A 25_M 0.58 0.00
135_L 30_R 0.58 0.00
181_R 10_A 0.57 0.00
84_K 38_G 0.57 0.00
108_N 7_H 0.57 0.00
51_R 12_K 0.56 0.00
27_N 30_R 0.56 0.00
88_I 44_K 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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