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OPENSEQ.org
L05 - L15
UniProt: Q5SHQ0 - Q5SHQ7
Length: 332
Sequences: 1376
Seq/Len: 4.29
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoDLOContact Map
1vq81vq8DLOContact Map
1vqp1vqpDLOContact Map
1vqm1vqmDLOContact Map
1vql1vqlDLOContact Map
1vqk1vqkDLOContact Map
1yhq1yhqDLOContact Map
1s721s72DLOContact Map
1vq91vq9DLOContact Map
1vqn1vqnDLOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_E 106_L 0.94 0.01
121_N 33_R 0.88 0.01
88_I 40_S 0.83 0.01
27_N 137_K 0.82 0.01
176_L 4_S 0.78 0.01
100_W 81_Q 0.78 0.01
151_A 42_S 0.75 0.01
135_L 7_R 0.73 0.01
96_R 13_N 0.71 0.00
21_R 125_V 0.70 0.00
159_V 122_P 0.69 0.00
97_D 6_L 0.67 0.00
142_P 43_G 0.67 0.00
51_R 61_R 0.66 0.00
41_Q 29_K 0.66 0.00
77_I 16_R 0.66 0.00
21_R 33_R 0.66 0.00
132_N 24_G 0.66 0.00
49_D 40_S 0.64 0.00
86_M 84_N 0.64 0.00
114_I 111_R 0.63 0.00
50_A 40_S 0.62 0.00
38_V 131_S 0.62 0.00
109_V 49_R 0.62 0.00
74_K 82_G 0.61 0.00
135_L 56_S 0.60 0.00
101_I 9_N 0.60 0.00
135_L 60_M 0.59 0.00
24_G 31_A 0.59 0.00
107_L 76_K 0.59 0.00
105_K 97_P 0.59 0.00
74_K 80_Y 0.58 0.00
149_V 84_N 0.58 0.00
59_E 137_K 0.58 0.00
105_K 58_T 0.58 0.00
40_N 3_L 0.57 0.00
37_V 137_K 0.57 0.00
181_R 128_H 0.57 0.00
169_A 65_R 0.57 0.00
171_A 16_R 0.56 0.00
181_R 68_Q 0.56 0.00
100_W 111_R 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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