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OPENSEQ.org
L05 - L30
UniProt: Q5SHQ0 - Q5SHQ6
Length: 242
Sequences: 920
Seq/Len: 3.87
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoDWContact Map
1vq81vq8DWContact Map
1vqp1vqpDWContact Map
1vqm1vqmDWContact Map
1vql1vqlDWContact Map
1vqk1vqkDWContact Map
1yhq1yhqDWContact Map
1s721s72DWContact Map
1vq91vq9DWContact Map
1vqn1vqnDWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_R 15_Y 0.86 0.00
19_L 49_K 0.83 0.00
169_A 39_D 0.79 0.00
77_I 11_S 0.78 0.00
79_N 25_A 0.78 0.00
38_V 52_H 0.76 0.00
160_V 52_H 0.75 0.00
159_V 42_A 0.73 0.00
49_D 8_L 0.73 0.00
170_R 35_R 0.73 0.00
71_T 46_N 0.69 0.00
78_S 14_G 0.68 0.00
62_L 47_V 0.68 0.00
114_I 56_V 0.67 0.00
11_Y 5_K 0.67 0.00
156_D 58_V 0.66 0.00
100_W 17_K 0.66 0.00
81_K 50_V 0.65 0.00
82_L 16_P 0.65 0.00
21_R 37_L 0.64 0.00
61_A 38_E 0.64 0.00
33_R 54_V 0.64 0.00
10_K 3_R 0.63 0.00
149_V 35_R 0.63 0.00
96_R 54_V 0.63 0.00
153_R 14_G 0.63 0.00
135_L 29_R 0.63 0.00
164_E 40_T 0.62 0.00
88_I 58_V 0.62 0.00
100_W 58_V 0.62 0.00
135_L 37_L 0.60 0.00
156_D 15_Y 0.60 0.00
131_Y 35_R 0.60 0.00
86_M 19_Q 0.59 0.00
31_V 44_R 0.59 0.00
34_L 51_A 0.57 0.00
14_E 42_A 0.57 0.00
26_Q 47_V 0.56 0.00
174_E 38_E 0.56 0.00
37_V 59_V 0.56 0.00
180_F 30_R 0.56 0.00
169_A 35_R 0.56 0.00
59_E 19_Q 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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