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OPENSEQ.org
L05 - L06
UniProt: Q5SHQ0 - Q5SHQ3
Length: 362
Sequences: 1679
Seq/Len: 4.73
I_Prob: 0.07
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoDEContact Map
1vq81vq8DEContact Map
1vqp1vqpDEContact Map
1vqm1vqmDEContact Map
1vql1vqlDEContact Map
1vqk1vqkDEContact Map
1yhq1yhqDEContact Map
1s721s72DEContact Map
1vq91vq9DEContact Map
1vqn1vqnDEContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_D 177_G 1.09 0.07
49_D 104_E 0.93 0.04
158_A 173_P 0.91 0.04
150_D 177_G 0.80 0.03
135_L 13_K 0.77 0.03
82_L 133_V 0.70 0.02
31_V 72_I 0.68 0.02
145_T 109_F 0.67 0.02
84_K 171_L 0.66 0.02
149_V 39_P 0.66 0.02
96_R 116_E 0.65 0.02
64_T 33_L 0.63 0.01
44_G 94_Y 0.62 0.01
74_K 146_A 0.62 0.01
52_I 90_K 0.61 0.01
87_P 166_G 0.61 0.01
60_L 53_E 0.61 0.01
27_N 38_S 0.61 0.01
107_L 42_R 0.60 0.01
156_D 62_K 0.60 0.01
101_I 41_M 0.59 0.01
91_R 87_L 0.59 0.01
41_Q 173_P 0.59 0.01
120_L 99_V 0.59 0.01
170_R 120_G 0.58 0.01
74_K 86_E 0.58 0.01
105_K 153_K 0.58 0.01
167_E 117_P 0.58 0.01
86_M 174_G 0.57 0.01
90_L 166_G 0.57 0.01
165_T 86_E 0.57 0.01
64_T 146_A 0.56 0.01
53_L 178_A 0.56 0.01
182_K 37_V 0.56 0.01
17_P 153_K 0.56 0.01
53_L 106_T 0.56 0.01
115_R 108_G 0.56 0.01
58_Q 42_R 0.55 0.01
13_E 42_R 0.55 0.01
17_P 19_V 0.55 0.01
109_V 176_A 0.55 0.01
132_N 111_H 0.55 0.01
178_F 151_I 0.55 0.01
124_S 96_A 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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