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OPENSEQ.org
L05 - S10
UniProt: Q5SHQ0 - Q5SHN7
Length: 287
Sequences: 1173
Seq/Len: 4.22
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2dG 3v2eJ 3v2fGContact Map
2j002j00J 2j01G 2j02J 2j03GContact Map
4juw4juwJ 4juxGContact Map
4kix4kixF 4kiyJ 4kizF 4kj0J 4kj1F 4kj2J 4kj3F 4kj4JContact Map
4kj54kj5F 4kj6J 4kj7F 4kj8J 4kj9F 4kjaJ 4kjbF 4kjcJContact Map
3knh3knhJ 3kniG 3knjJ 3knkGContact Map
3ohc3ohcJ 3ohdJ 3ohjG 3ohkGContact Map
3uz63uz6M 3uz7M 3uz8G 3uz9GContact Map
3u5b3u5cU 3u5eJ 3u5gU 3u5iJContact Map
3oge3ogeJ 3ogyJ 3oh5G 3oh7GContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_R 48_T 1.05 0.04
115_R 82_I 1.04 0.04
135_L 15_T 1.00 0.03
79_N 47_F 0.98 0.03
51_R 60_R 0.97 0.03
96_R 91_P 0.93 0.03
132_N 92_T 0.93 0.03
27_N 53_P 0.93 0.03
59_E 87_T 0.90 0.02
176_L 35_S 0.88 0.02
75_K 56_H 0.87 0.02
133_L 27_A 0.86 0.02
135_L 16_L 0.85 0.02
182_K 53_P 0.85 0.02
177_G 3_K 0.82 0.02
48_E 47_F 0.81 0.02
38_V 64_E 0.80 0.02
47_K 56_H 0.80 0.02
49_D 35_S 0.79 0.02
49_D 47_F 0.79 0.02
181_R 16_L 0.77 0.02
156_D 79_R 0.77 0.02
18_E 10_G 0.76 0.01
16_R 25_E 0.75 0.01
76_S 69_N 0.74 0.01
118_R 77_P 0.74 0.01
167_E 20_A 0.73 0.01
48_E 96_I 0.73 0.01
140_I 38_I 0.73 0.01
115_R 22_K 0.72 0.01
47_K 55_K 0.72 0.01
43_L 75_I 0.71 0.01
84_K 53_P 0.71 0.01
39_I 45_R 0.69 0.01
135_L 47_F 0.69 0.01
153_R 58_D 0.69 0.01
45_E 8_L 0.68 0.01
160_V 16_L 0.68 0.01
16_R 15_T 0.68 0.01
178_F 16_L 0.67 0.01
181_R 11_F 0.67 0.01
14_E 20_A 0.67 0.01
29_W 20_A 0.67 0.01
48_E 56_H 0.67 0.01
91_R 45_R 0.67 0.01
169_A 79_R 0.66 0.01
74_K 92_T 0.66 0.01
98_R 71_L 0.66 0.01
175_L 82_I 0.66 0.01
171_A 96_I 0.66 0.01
9_R 87_T 0.65 0.01
169_A 86_M 0.65 0.01
139_L 58_D 0.65 0.01
14_E 43_R 0.64 0.01
139_L 96_I 0.64 0.01
123_N 45_R 0.63 0.01
74_K 21_Q 0.63 0.01
150_D 92_T 0.63 0.01
60_L 34_V 0.62 0.01
155_M 14_K 0.62 0.01
49_D 53_P 0.62 0.01
27_N 74_I 0.61 0.01
24_G 46_R 0.61 0.01
146_Y 11_F 0.61 0.01
34_L 66_R 0.61 0.01
182_K 21_Q 0.60 0.01
29_W 52_G 0.60 0.01
31_V 2_P 0.60 0.01
46_A 61_E 0.60 0.01
156_D 54_F 0.60 0.01
178_F 79_R 0.59 0.01
151_A 80_K 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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