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OPENSEQ.org
L05 - L34
UniProt: Q5SHQ0 - P80340
Length: 231
Sequences: 877
Seq/Len: 3.93
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dG7 3v2fG7Contact Map
2j002j01G7 2j03G7Contact Map
4juw4juxG7Contact Map
4kix4kixF2 4kizF2 4kj1F2 4kj3F2Contact Map
4kj54kj5F2 4kj7F2 4kj9F2 4kjbF2Contact Map
2zjr2zjrD2Contact Map
4btc4btdG7Contact Map
3uyd3uyeG7 3uygG7Contact Map
4gd13r8sF2 3r8tF2Contact Map
3ohc3ohjG7 3ohkG7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_E 25_P 0.89 0.00
43_L 32_K 0.86 0.00
181_R 11_K 0.81 0.00
146_Y 1_M 0.80 0.00
73_A 42_L 0.78 0.00
84_K 43_T 0.77 0.00
78_S 14_K 0.75 0.00
54_E 31_L 0.73 0.00
72_R 41_R 0.73 0.00
70_V 41_R 0.72 0.00
115_R 16_H 0.72 0.00
109_V 25_P 0.70 0.00
50_A 8_N 0.70 0.00
156_D 10_R 0.70 0.00
8_K 22_M 0.69 0.00
87_P 33_R 0.68 0.00
181_R 14_K 0.68 0.00
132_N 11_K 0.68 0.00
128_R 30_V 0.66 0.00
47_K 8_N 0.65 0.00
84_K 44_P 0.65 0.00
133_L 40_W 0.65 0.00
155_M 20_A 0.64 0.00
169_A 40_W 0.63 0.00
157_I 19_R 0.63 0.00
152_L 44_P 0.62 0.00
55_K 32_K 0.60 0.00
157_I 9_R 0.60 0.00
76_S 7_P 0.60 0.00
152_L 1_M 0.59 0.00
92_V 30_V 0.59 0.00
80_F 14_K 0.58 0.00
77_I 15_T 0.57 0.00
151_A 31_L 0.57 0.00
170_R 8_N 0.57 0.00
160_V 10_R 0.57 0.00
150_D 29_K 0.56 0.00
146_Y 14_K 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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