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OPENSEQ.org
L05 - L28
UniProt: Q5SHQ0 - P60494
Length: 280
Sequences: 975
Seq/Len: 4.05
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dG1 3v2fG1Contact Map
2j002j01G1 2j03G1Contact Map
4juw4juxG1Contact Map
4kix4kixFX 4kizFX 4kj1FX 4kj3FXContact Map
4kj54kj5FX 4kj7FX 4kj9FX 4kjbFXContact Map
2zjr2zjrDUContact Map
4btc4btdG1Contact Map
3uyd3uyeGZ 3uygGZContact Map
4gd13r8sFX 3r8tFXContact Map
3ohc3ohjG1 3ohkG1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_V 46_L 0.84 0.00
10_K 2_S 0.83 0.00
135_L 47_Q 0.82 0.00
122_P 59_T 0.82 0.00
27_N 18_I 0.78 0.00
132_N 67_I 0.71 0.00
5_V 3_K 0.70 0.00
175_L 73_L 0.70 0.00
49_D 65_S 0.69 0.00
115_R 10_K 0.68 0.00
177_G 49_V 0.65 0.00
164_E 38_S 0.65 0.00
37_V 37_I 0.64 0.00
174_E 62_V 0.64 0.00
137_E 18_I 0.63 0.00
74_K 59_T 0.63 0.00
103_L 9_G 0.62 0.00
18_E 59_T 0.62 0.00
138_Q 2_S 0.61 0.00
48_E 39_K 0.61 0.00
58_Q 62_V 0.61 0.00
177_G 64_A 0.61 0.00
19_L 59_T 0.61 0.00
133_L 54_A 0.61 0.00
174_E 16_N 0.61 0.00
50_A 42_Q 0.61 0.00
133_L 55_G 0.61 0.00
54_E 47_Q 0.60 0.00
11_Y 12_P 0.59 0.00
109_V 40_R 0.59 0.00
47_K 13_I 0.58 0.00
68_P 65_S 0.58 0.00
107_L 46_L 0.58 0.00
30_E 37_I 0.58 0.00
149_V 16_N 0.58 0.00
105_K 64_A 0.58 0.00
150_D 34_T 0.58 0.00
132_N 47_Q 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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