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OPENSEQ.org
L05 - L19
UniProt: Q5SHQ0 - P60490
Length: 328
Sequences: 1144
Seq/Len: 3.89
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dGT 3v2fGTContact Map
2j002j01GT 2j03GTContact Map
4juw4juxGTContact Map
4kix4kixFP 4kizFP 4kj1FP 4kj3FPContact Map
4kj54kj5FP 4kj7FP 4kj9FP 4kjbFPContact Map
2zjr2zjrDMContact Map
4btc4btdGTContact Map
3uyd3uyeGR 3uygGRContact Map
4gd13r8sFP 3r8tFPContact Map
3ohc3ohjGT 3ohkGTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_R 90_Q 0.93 0.01
41_Q 65_K 0.86 0.01
139_L 98_K 0.85 0.00
153_R 39_R 0.83 0.00
135_L 14_Y 0.83 0.00
10_K 104_N 0.78 0.00
146_Y 46_E 0.77 0.00
52_I 65_K 0.75 0.00
178_F 82_L 0.72 0.00
71_T 72_V 0.71 0.00
37_V 105_L 0.70 0.00
49_D 70_V 0.70 0.00
81_K 113_K 0.70 0.00
29_W 110_I 0.68 0.00
72_R 109_E 0.66 0.00
68_P 66_V 0.66 0.00
8_K 45_F 0.65 0.00
74_K 29_R 0.65 0.00
120_L 8_K 0.65 0.00
86_M 62_T 0.65 0.00
40_N 39_R 0.64 0.00
169_A 96_R 0.63 0.00
24_G 15_V 0.63 0.00
22_R 72_V 0.63 0.00
136_R 60_T 0.63 0.00
132_N 33_K 0.63 0.00
120_L 48_I 0.62 0.00
81_K 32_Y 0.62 0.00
26_Q 17_T 0.62 0.00
48_E 111_R 0.62 0.00
149_V 34_V 0.62 0.00
169_A 62_T 0.61 0.00
59_E 75_I 0.61 0.00
115_R 34_V 0.61 0.00
124_S 22_F 0.61 0.00
133_L 75_I 0.60 0.00
82_L 57_F 0.60 0.00
135_L 74_R 0.60 0.00
171_A 42_I 0.60 0.00
27_N 48_I 0.60 0.00
163_A 88_I 0.59 0.00
27_N 116_A 0.59 0.00
156_D 97_A 0.59 0.00
118_R 10_V 0.59 0.00
18_E 45_F 0.59 0.00
52_I 113_K 0.57 0.00
60_L 40_T 0.57 0.00
96_R 49_V 0.57 0.00
5_V 77_P 0.56 0.00
156_D 62_T 0.56 0.00
81_K 61_F 0.56 0.00
49_D 65_K 0.56 0.00
107_L 4_G 0.56 0.00
13_E 83_I 0.56 0.00
122_P 66_V 0.56 0.00
34_L 66_V 0.56 0.00
136_R 42_I 0.56 0.00
68_P 75_I 0.56 0.00
181_R 49_V 0.56 0.00
91_R 45_F 0.56 0.00
79_N 98_K 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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