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OPENSEQ.org
L05 - S07
UniProt: Q5SHQ0 - P17291
Length: 338
Sequences: 1348
Seq/Len: 4.04
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cG 3v2dG 3v2eG 3v2fGContact Map
2j002j00G 2j01G 2j02G 2j03GContact Map
4juw4juwG 4juxGContact Map
4kix4kixF 4kiyG 4kizF 4kj0G 4kj1F 4kj2G 4kj3F 4kj4GContact Map
4kj54kj5F 4kj6G 4kj7F 4kj8G 4kj9F 4kjaG 4kjbF 4kjcGContact Map
3ohc3ohcG 3ohdG 3ohjG 3ohkGContact Map
3knh3knhG 3kniG 3knjG 3knkGContact Map
3uz63uz6J 3uz7J 3uz8G 3uz9GContact Map
3oge3ogeG 3ogyG 3oh5G 3oh7GContact Map
3uyd3uydJ 3uyeG 3uyfJ 3uygGContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
151_A 56_Q 0.91 0.00
29_W 96_Q 0.89 0.00
13_E 19_G 0.84 0.00
176_L 98_S 0.82 0.00
69_A 98_S 0.80 0.00
149_V 143_R 0.79 0.00
49_D 131_K 0.78 0.00
50_A 101_L 0.77 0.00
60_L 58_P 0.77 0.00
139_L 18_Y 0.74 0.00
169_A 76_R 0.73 0.00
96_R 72_R 0.72 0.00
176_L 154_Y 0.71 0.00
39_I 94_R 0.70 0.00
84_K 113_E 0.70 0.00
8_K 124_L 0.69 0.00
178_F 21_V 0.69 0.00
84_K 32_R 0.69 0.00
8_K 57_E 0.69 0.00
148_M 143_R 0.69 0.00
23_F 143_R 0.68 0.00
47_K 4_R 0.68 0.00
27_N 20_D 0.68 0.00
22_R 26_F 0.68 0.00
145_T 97_Q 0.68 0.00
164_E 52_E 0.67 0.00
140_I 107_A 0.67 0.00
174_E 9_V 0.67 0.00
19_L 110_Q 0.67 0.00
88_I 13_Q 0.66 0.00
14_E 93_P 0.66 0.00
104_E 141_V 0.66 0.00
8_K 4_R 0.66 0.00
48_E 18_Y 0.65 0.00
34_L 106_Q 0.65 0.00
50_A 17_V 0.65 0.00
40_N 76_R 0.64 0.00
79_N 93_P 0.64 0.00
144_I 51_Q 0.64 0.00
132_N 152_A 0.64 0.00
170_R 11_Q 0.63 0.00
169_A 67_E 0.63 0.00
132_N 24_T 0.63 0.00
20_I 59_L 0.63 0.00
156_D 26_F 0.62 0.00
160_V 68_N 0.62 0.00
108_N 50_I 0.61 0.00
21_R 57_E 0.61 0.00
120_L 105_V 0.61 0.00
49_D 2_A 0.61 0.00
26_Q 56_Q 0.61 0.00
169_A 107_A 0.61 0.00
20_I 50_I 0.61 0.00
176_L 87_V 0.61 0.00
175_L 156_W 0.61 0.00
53_L 133_G 0.61 0.00
132_N 43_F 0.60 0.00
151_A 14_P 0.60 0.00
68_P 97_Q 0.60 0.00
47_K 134_A 0.60 0.00
149_V 48_K 0.60 0.00
178_F 61_V 0.60 0.00
139_L 77_S 0.60 0.00
178_F 4_R 0.59 0.00
43_L 119_R 0.59 0.00
9_R 130_G 0.59 0.00
13_E 96_Q 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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