OPENSEQ.org
L24 - S06
UniProt: Q5SHP9 - Q5SLP8
Length: 211
Sequences: 1250
Seq/Len: 6.22
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2dY 3v2eF 3v2fYContact Map
2j002j00F 2j01Y 2j02F 2j03YContact Map
4juw4juwF 4juxYContact Map
4kix4kixU 4kiyF 4kizU 4kj0F 4kj1U 4kj2F 4kj3U 4kj4FContact Map
4kj54kj5U 4kj6F 4kj7U 4kj8F 4kj9U 4kjaF 4kjbU 4kjcFContact Map
3ohc3ohcF 3ohdF 3ohjY 3ohkYContact Map
3knh3knhF 3kniY 3knjF 3knkYContact Map
3uz63uz6I 3uz7I 3uz8U 3uz9UContact Map
3oge3ogeF 3ogyF 3oh5Y 3oh7YContact Map
3uyd3uydI 3uyeU 3uyfI 3uygUContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_K 69_E 0.81 0.00
27_V 65_V 0.78 0.00
101_K 14_L 0.75 0.00
69_A 75_L 0.69 0.00
64_E 62_W 0.67 0.00
47_K 95_E 0.66 0.00
26_K 61_L 0.64 0.00
41_G 31_E 0.64 0.00
57_Q 48_L 0.63 0.00
30_V 57_Q 0.63 0.00
15_V 63_Y 0.62 0.00
22_G 62_W 0.62 0.00
59_G 43_L 0.61 0.00
63_K 80_R 0.61 0.00
54_K 9_V 0.60 0.00
16_A 46_R 0.60 0.00
27_V 19_L 0.59 0.00
36_A 23_K 0.59 0.00
26_K 88_V 0.59 0.00
14_L 69_E 0.58 0.00
47_K 15_D 0.56 0.00
14_L 51_P 0.56 0.00
106_L 13_N 0.55 0.00
23_R 8_I 0.55 0.00
104_G 89_M 0.55 0.00
101_K 25_I 0.55 0.00
14_L 86_R 0.53 0.00
106_L 83_D 0.53 0.00
66_P 88_V 0.53 0.00
83_T 41_E 0.52 0.00
22_G 30_L 0.52 0.00
31_L 46_R 0.52 0.00
49_V 52_I 0.52 0.00
48_A 35_A 0.52 0.00
73_R 1_M 0.51 0.00
68_H 33_Y 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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