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OPENSEQ.org
L24 - L36
UniProt: Q5SHP9 - Q5SHR2
Length: 147
Sequences: 867
Seq/Len: 6.24
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dY9 3v2fY9Contact Map
2j002j01Y9 2j03Y9Contact Map
4juw4juxY9Contact Map
4kix4kixU4 4kizU4 4kj1U4 4kj3U4Contact Map
4kj54kj5U4 4kj7U4 4kj9U4 4kjbU4Contact Map
2zjr2zjrR4Contact Map
4btc4btdY9Contact Map
4gd13r8sU4 3r8tU4Contact Map
3knh3kniY9 3knkY9Contact Map
3v223v23Y9 3v25Y9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
48_A 37_G 0.99 0.03
59_G 15_K 0.86 0.02
107_D 4_R 0.82 0.02
50_R 33_K 0.81 0.01
95_K 4_R 0.81 0.01
10_G 24_Y 0.74 0.01
44_I 4_R 0.65 0.01
8_K 17_I 0.62 0.01
33_K 31_K 0.61 0.01
106_L 10_I 0.61 0.01
45_V 16_V 0.58 0.01
107_D 20_H 0.58 0.01
38_I 35_R 0.57 0.01
12_T 29_N 0.57 0.01
98_V 3_V 0.56 0.01
62_E 20_H 0.56 0.01
51_V 5_A 0.55 0.01
105_A 5_A 0.55 0.01
15_V 7_V 0.55 0.01
6_H 22_R 0.54 0.01
22_G 33_K 0.54 0.01
48_A 3_V 0.53 0.01
28_K 25_V 0.53 0.01
100_A 16_V 0.53 0.01
50_R 31_K 0.52 0.01
103_G 4_R 0.52 0.01
14_L 35_R 0.52 0.01
83_T 29_N 0.52 0.01
94_K 31_K 0.51 0.01
64_E 29_N 0.51 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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