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OPENSEQ.org
L24 - L30
UniProt: Q5SHP9 - Q5SHQ6
Length: 170
Sequences: 1090
Seq/Len: 6.81
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoTWContact Map
1vq81vq8TWContact Map
1vqp1vqpTWContact Map
1vqm1vqmTWContact Map
1vql1vqlTWContact Map
1vqk1vqkTWContact Map
1yhq1yhqTWContact Map
1s721s72TWContact Map
1vq91vq9TWContact Map
1vqn1vqnTWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
106_L 51_A 0.77 0.00
50_R 5_K 0.77 0.00
45_V 36_V 0.75 0.00
47_K 29_R 0.75 0.00
75_I 52_H 0.72 0.00
104_G 38_E 0.69 0.00
42_V 31_L 0.65 0.00
16_A 10_K 0.62 0.00
8_K 13_I 0.60 0.00
73_R 10_K 0.58 0.00
16_A 48_E 0.57 0.00
105_A 8_L 0.57 0.00
16_A 6_V 0.57 0.00
103_G 14_G 0.56 0.00
99_C 52_H 0.55 0.00
38_I 33_Q 0.54 0.00
41_G 22_A 0.53 0.00
8_K 49_K 0.52 0.00
86_R 22_A 0.52 0.00
37_V 22_A 0.50 0.00
76_C 19_Q 0.50 0.00
108_T 58_V 0.49 0.00
72_V 24_K 0.49 0.00
67_L 47_V 0.49 0.00
50_R 1_M 0.49 0.00
17_S 38_E 0.49 0.00
71_K 20_K 0.49 0.00
50_R 55_R 0.48 0.00
76_C 52_H 0.47 0.00
71_K 46_N 0.47 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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