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OPENSEQ.org
L24 - S08
UniProt: Q5SHP9 - Q5SHQ2
Length: 248
Sequences: 1351
Seq/Len: 5.82
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2dY 3v2eH 3v2fYContact Map
2j002j00H 2j01Y 2j02H 2j03YContact Map
4juw4juwH 4juxYContact Map
4kix4kixU 4kiyH 4kizU 4kj0H 4kj1U 4kj2H 4kj3U 4kj4HContact Map
4kj54kj5U 4kj6H 4kj7U 4kj8H 4kj9U 4kjaH 4kjbU 4kjcHContact Map
3knh3knhH 3kniY 3knjH 3knkYContact Map
3ohc3ohcH 3ohdH 3ohjY 3ohkYContact Map
3uz63uz6K 3uz7K 3uz8U 3uz9UContact Map
3u5b3u5cW 3u5eY 3u5gW 3u5iYContact Map
3oge3ogeH 3ogyH 3oh5Y 3oh7YContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_A 30_R 0.80 0.00
52_S 134_I 0.75 0.00
74_P 119_L 0.74 0.00
106_L 48_Y 0.73 0.00
26_K 20_Y 0.71 0.00
46_K 44_F 0.69 0.00
50_R 21_K 0.69 0.00
28_K 112_L 0.69 0.00
42_V 98_K 0.68 0.00
29_E 18_R 0.67 0.00
40_E 89_P 0.65 0.00
95_K 42_E 0.64 0.00
48_A 27_P 0.64 0.00
51_V 133_L 0.61 0.00
56_P 34_E 0.59 0.00
57_Q 60_R 0.59 0.00
95_K 79_V 0.59 0.00
29_E 37_R 0.59 0.00
108_T 126_K 0.58 0.00
57_Q 57_P 0.58 0.00
10_G 101_P 0.58 0.00
7_V 51_V 0.57 0.00
94_K 99_E 0.57 0.00
47_K 91_R 0.57 0.00
41_G 88_K 0.56 0.00
14_L 47_G 0.56 0.00
64_E 100_I 0.55 0.00
24_V 16_A 0.55 0.00
47_K 134_I 0.54 0.00
39_V 107_L 0.54 0.00
66_P 51_V 0.54 0.00
5_M 78_Q 0.54 0.00
66_P 30_R 0.54 0.00
28_K 90_G 0.54 0.00
51_V 12_R 0.54 0.00
64_E 19_V 0.54 0.00
71_K 9_M 0.53 0.00
6_H 37_R 0.53 0.00
16_A 104_R 0.53 0.00
36_A 128_G 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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