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OPENSEQ.org
L24 - S14
UniProt: Q5SHP9 - Q5SHQ1
Length: 171
Sequences: 1256
Seq/Len: 7.71
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dY 3v2eN 3v2fYContact Map
2j002j00N 2j01Y 2j02N 2j03YContact Map
4juw4juwN 4juxYContact Map
3knh3knhN 3kniY 3knjN 3knkYContact Map
3ohc3ohcN 3ohdN 3ohjY 3ohkYContact Map
3uz63uz6Q 3uz7Q 3uz8U 3uz9UContact Map
3u5b3u5cd 3u5eY 3u5gd 3u5iYContact Map
3oge3ogeN 3ogyN 3oh5Y 3oh7YContact Map
3uyd3uydQ 3uyeU 3uyfQ 3uygUContact Map
3ohy3ohyN 3ohzY 3oi0N 3oi1YContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_K 52_Q 0.99 0.03
56_P 59_A 0.65 0.01
59_G 30_A 0.61 0.01
48_A 49_H 0.59 0.01
60_F 36_F 0.58 0.01
58_G 27_C 0.58 0.01
46_K 37_F 0.57 0.01
105_A 53_L 0.57 0.01
29_E 44_L 0.57 0.01
102_C 35_R 0.56 0.01
79_C 27_C 0.56 0.01
71_K 36_F 0.56 0.01
63_K 57_R 0.55 0.01
45_V 40_C 0.55 0.01
106_L 22_T 0.55 0.01
102_C 32_S 0.54 0.01
37_V 50_K 0.54 0.01
50_R 24_C 0.53 0.01
57_Q 59_A 0.52 0.01
10_G 6_L 0.51 0.01
72_V 33_V 0.49 0.01
50_R 30_A 0.48 0.01
74_P 50_K 0.48 0.01
26_K 38_G 0.48 0.01
45_V 30_A 0.48 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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