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OPENSEQ.org
L24 - L29
UniProt: Q5SHP9 - Q5SHP6
Length: 182
Sequences: 1188
Seq/Len: 7.11
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoTVContact Map
1vq81vq8TVContact Map
1vqp1vqpTVContact Map
1vqm1vqmTVContact Map
1vql1vqlTVContact Map
1vqk1vqkTVContact Map
1yhq1yhqTVContact Map
1s721s72TVContact Map
1vq91vq9TVContact Map
1vqn1vqnTVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
47_K 64_L 0.75 0.00
104_G 20_E 0.73 0.00
81_K 16_L 0.69 0.00
81_K 63_V 0.64 0.00
6_H 25_V 0.64 0.00
67_L 69_R 0.63 0.00
86_R 70_Q 0.62 0.00
16_A 40_S 0.60 0.00
47_K 37_F 0.60 0.00
12_T 16_L 0.59 0.00
86_R 59_R 0.55 0.00
61_I 55_R 0.54 0.00
10_G 40_S 0.53 0.00
30_V 22_E 0.52 0.00
41_G 42_G 0.52 0.00
80_G 54_K 0.52 0.00
71_K 41_I 0.52 0.00
22_G 43_Q 0.51 0.00
47_K 19_V 0.51 0.00
29_E 13_A 0.51 0.00
107_D 10_L 0.50 0.00
63_K 54_K 0.50 0.00
25_G 54_K 0.50 0.00
106_L 51_R 0.49 0.00
72_V 13_A 0.49 0.00
62_E 25_V 0.49 0.00
33_K 29_K 0.48 0.00
8_K 27_E 0.48 0.00
29_E 22_E 0.48 0.00
44_I 50_I 0.48 0.00
42_V 67_K 0.48 0.00
50_R 47_N 0.48 0.00
48_A 50_I 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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