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OPENSEQ.org
L24 - S10
UniProt: Q5SHP9 - Q5SHN7
Length: 215
Sequences: 1092
Seq/Len: 5.43
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2dY 3v2eJ 3v2fYContact Map
2j002j00J 2j01Y 2j02J 2j03YContact Map
4juw4juwJ 4juxYContact Map
4kix4kixU 4kiyJ 4kizU 4kj0J 4kj1U 4kj2J 4kj3U 4kj4JContact Map
4kj54kj5U 4kj6J 4kj7U 4kj8J 4kj9U 4kjaJ 4kjbU 4kjcJContact Map
3knh3knhJ 3kniY 3knjJ 3knkYContact Map
3ohc3ohcJ 3ohdJ 3ohjY 3ohkYContact Map
3uz63uz6M 3uz7M 3uz8U 3uz9UContact Map
3oge3ogeJ 3ogyJ 3oh5Y 3oh7YContact Map
3uyd3uydM 3uyeU 3uyfM 3uygUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
48_A 80_K 0.86 0.00
84_R 73_D 0.81 0.00
59_G 31_G 0.81 0.00
10_G 21_Q 0.80 0.00
63_K 56_H 0.78 0.00
38_I 80_K 0.76 0.00
96_I 68_H 0.73 0.00
60_F 52_G 0.71 0.00
27_V 50_I 0.70 0.00
49_V 10_G 0.70 0.00
44_I 62_H 0.67 0.00
101_K 38_I 0.67 0.00
10_G 96_I 0.65 0.00
9_K 3_K 0.65 0.00
8_K 87_T 0.65 0.00
15_V 49_V 0.65 0.00
83_T 79_R 0.65 0.00
51_V 13_H 0.64 0.00
77_P 10_G 0.64 0.00
67_L 87_T 0.63 0.00
48_A 10_G 0.63 0.00
7_V 11_F 0.62 0.00
36_A 98_I 0.62 0.00
65_A 69_N 0.62 0.00
75_I 11_F 0.62 0.00
30_V 15_T 0.60 0.00
106_L 35_S 0.60 0.00
105_A 43_R 0.60 0.00
105_A 82_I 0.60 0.00
9_K 12_D 0.59 0.00
64_E 58_D 0.59 0.00
106_L 43_R 0.59 0.00
21_K 45_R 0.58 0.00
11_D 70_R 0.58 0.00
55_Y 98_I 0.58 0.00
106_L 21_Q 0.58 0.00
87_K 28_R 0.58 0.00
8_K 11_F 0.57 0.00
5_M 11_F 0.57 0.00
105_A 16_L 0.57 0.00
107_D 33_Q 0.57 0.00
64_E 61_E 0.57 0.00
52_S 13_H 0.56 0.00
37_V 63_F 0.56 0.00
30_V 22_K 0.56 0.00
102_C 54_F 0.56 0.00
108_T 72_V 0.55 0.00
104_G 11_F 0.55 0.00
67_L 18_A 0.55 0.00
61_I 38_I 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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