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OPENSEQ.org
L24 - S12
UniProt: Q5SHP9 - Q5SHN3
Length: 242
Sequences: 1078
Seq/Len: 4.73
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2dY 3v2eL 3v2fYContact Map
2j002j00L 2j01Y 2j02L 2j03YContact Map
4juw4juwL 4juxYContact Map
4kix4kixU 4kiyL 4kizU 4kj0L 4kj1U 4kj2L 4kj3U 4kj4LContact Map
4kj54kj5U 4kj6L 4kj7U 4kj8L 4kj9U 4kjaL 4kjbU 4kjcLContact Map
3ohc3ohcL 3ohdL 3ohjY 3ohkYContact Map
3knh3knhL 3kniY 3knjL 3knkYContact Map
3uz63uz6O 3uz7O 3uz8U 3uz9UContact Map
3oge3ogeL 3ogyL 3oh5Y 3oh7YContact Map
3uyd3uydO 3uyeU 3uyfO 3uygUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
46_K 49_L 0.98 0.02
60_F 23_A 0.94 0.01
49_V 30_R 0.86 0.01
60_F 30_R 0.84 0.01
48_A 102_Y 0.84 0.01
8_K 104_A 0.81 0.01
6_H 34_C 0.80 0.01
108_T 101_V 0.80 0.01
28_K 53_A 0.79 0.01
12_T 18_K 0.76 0.01
105_A 116_K 0.75 0.01
76_C 68_P 0.74 0.01
81_K 52_V 0.74 0.01
6_H 60_G 0.74 0.01
32_P 68_P 0.74 0.01
83_T 68_P 0.73 0.01
57_Q 105_A 0.72 0.01
75_I 113_S 0.71 0.01
107_D 121_K 0.70 0.01
32_P 35_T 0.70 0.01
27_V 71_G 0.70 0.01
23_R 105_A 0.69 0.01
16_A 98_V 0.68 0.01
95_K 79_V 0.68 0.01
46_K 36_V 0.67 0.01
72_V 49_L 0.67 0.01
81_K 17_K 0.66 0.01
16_A 4_I 0.66 0.01
98_V 35_T 0.64 0.01
56_P 104_A 0.64 0.01
90_L 81_L 0.62 0.01
105_A 79_V 0.62 0.01
53_P 70_E 0.61 0.01
67_L 20_K 0.61 0.01
52_S 58_T 0.61 0.01
9_K 53_A 0.61 0.01
24_V 109_D 0.61 0.01
57_Q 122_P 0.60 0.01
10_G 124_E 0.60 0.01
101_K 81_L 0.60 0.01
53_P 61_Y 0.59 0.01
79_C 98_V 0.59 0.01
108_T 54_K 0.59 0.01
79_C 81_L 0.59 0.01
66_P 16_R 0.59 0.01
66_P 125_A 0.58 0.01
99_C 68_P 0.58 0.01
10_G 16_R 0.58 0.01
7_V 71_G 0.58 0.01
48_A 38_R 0.58 0.01
8_K 17_K 0.58 0.01
37_V 113_S 0.57 0.01
55_Y 11_G 0.57 0.01
48_A 106_G 0.57 0.01
33_K 79_V 0.57 0.01
78_A 113_S 0.57 0.01
69_A 70_E 0.57 0.01
96_I 79_V 0.57 0.01
14_L 70_E 0.56 0.01
87_K 97_I 0.56 0.01
36_A 88_K 0.56 0.00
77_P 102_Y 0.56 0.00
100_A 59_S 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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