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OPENSEQ.org
L24 - S11
UniProt: Q5SHP9 - P80376
Length: 239
Sequences: 1145
Seq/Len: 5.00
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2dY 3v2eK 3v2fYContact Map
2j002j00K 2j01Y 2j02K 2j03YContact Map
4juw4juwK 4juxYContact Map
4kix4kixU 4kiyK 4kizU 4kj0K 4kj1U 4kj2K 4kj3U 4kj4KContact Map
4kj54kj5U 4kj6K 4kj7U 4kj8K 4kj9U 4kjaK 4kjbU 4kjcKContact Map
3ohc3ohcK 3ohdK 3ohjY 3ohkYContact Map
3knh3knhK 3kniY 3knjK 3knkYContact Map
3uz63uz6N 3uz7N 3uz8U 3uz9UContact Map
3u5b3u5cO 3u5eY 3u5gO 3u5iYContact Map
3oge3ogeK 3ogyK 3oh5Y 3oh7YContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
50_R 71_K 1.04 0.04
48_A 122_K 0.83 0.02
27_V 63_L 0.78 0.02
59_G 53_S 0.77 0.02
32_P 24_S 0.75 0.02
9_K 77_M 0.72 0.01
87_K 66_L 0.72 0.01
103_G 36_D 0.71 0.01
10_G 72_A 0.71 0.01
75_I 105_V 0.71 0.01
8_K 59_Y 0.71 0.01
35_Y 100_A 0.71 0.01
10_G 32_I 0.71 0.01
64_E 94_A 0.69 0.01
37_V 103_L 0.68 0.01
44_I 7_K 0.66 0.01
106_L 1_M 0.66 0.01
50_R 30_V 0.65 0.01
44_I 65_A 0.64 0.01
58_G 32_I 0.64 0.01
48_A 19_A 0.63 0.01
56_P 7_K 0.62 0.01
47_K 22_H 0.60 0.01
16_A 48_I 0.60 0.01
74_P 47_V 0.59 0.01
105_A 21_I 0.59 0.01
59_G 87_T 0.59 0.01
53_P 70_K 0.58 0.01
83_T 107_S 0.57 0.01
59_G 84_V 0.57 0.01
25_G 44_S 0.57 0.01
40_E 122_K 0.57 0.01
104_G 53_S 0.57 0.01
74_P 11_K 0.56 0.01
11_D 21_I 0.56 0.01
9_K 48_I 0.56 0.01
98_V 19_A 0.56 0.01
14_L 9_K 0.56 0.01
47_K 5_P 0.56 0.01
75_I 16_S 0.55 0.01
76_C 99_Q 0.55 0.01
78_A 40_I 0.55 0.01
102_C 94_A 0.55 0.01
52_S 114_V 0.55 0.01
83_T 75_Y 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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