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OPENSEQ.org
L24 - S09
UniProt: Q5SHP9 - P80374
Length: 238
Sequences: 1334
Seq/Len: 5.85
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dY 3v2eI 3v2fYContact Map
2j002j00I 2j01Y 2j02I 2j03YContact Map
4juw4juwI 4juxYContact Map
4kix4kixU 4kiyI 4kizU 4kj0I 4kj1U 4kj2I 4kj3U 4kj4IContact Map
4kj54kj5U 4kj6I 4kj7U 4kj8I 4kj9U 4kjaI 4kjbU 4kjcIContact Map
3ohc3ohcI 3ohdI 3ohjY 3ohkYContact Map
3knh3knhI 3kniY 3knjI 3knkYContact Map
3uz63uz6L 3uz7L 3uz8U 3uz9UContact Map
3u5b3u5cQ 3u5eY 3u5gQ 3u5iYContact Map
3oge3ogeI 3ogyI 3oh5Y 3oh7YContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_A 121_R 0.97 0.02
61_I 78_K 0.87 0.01
80_G 109_V 0.81 0.01
66_P 87_Q 0.70 0.01
102_C 93_R 0.68 0.01
33_K 90_P 0.68 0.01
14_L 92_Y 0.67 0.01
48_A 106_A 0.67 0.01
15_V 57_G 0.65 0.01
74_P 31_Q 0.65 0.01
54_K 79_L 0.63 0.01
77_P 13_A 0.63 0.01
23_R 122_A 0.62 0.01
38_I 36_Y 0.61 0.01
12_T 97_K 0.60 0.01
95_K 6_G 0.59 0.01
7_V 23_N 0.59 0.01
53_P 18_F 0.58 0.01
26_K 58_H 0.58 0.01
9_K 14_V 0.57 0.01
51_V 53_V 0.56 0.01
83_T 42_R 0.56 0.01
30_V 46_A 0.55 0.01
96_I 28_V 0.54 0.01
39_V 46_A 0.54 0.00
77_P 101_F 0.54 0.00
87_K 75_D 0.54 0.00
85_V 62_Y 0.54 0.00
12_T 86_V 0.53 0.00
107_D 52_A 0.53 0.00
49_V 118_K 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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