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OPENSEQ.org
L24 - S03
UniProt: Q5SHP9 - P80372
Length: 349
Sequences: 1135
Seq/Len: 3.62
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2dY 3v2eC 3v2fYContact Map
2j002j00C 2j01Y 2j02C 2j03YContact Map
4juw4juwC 4juxYContact Map
4kix4kixU 4kiyC 4kizU 4kj0C 4kj1U 4kj2C 4kj3U 4kj4CContact Map
4kj54kj5U 4kj6C 4kj7U 4kj8C 4kj9U 4kjaC 4kjbU 4kjcCContact Map
3knh3knhC 3kniY 3knjC 3knkYContact Map
3ohc3ohcC 3ohdC 3ohjY 3ohkYContact Map
3uz63uz6F 3uz7F 3uz8U 3uz9UContact Map
3u5b3u5cD 3u5eY 3u5gD 3u5iYContact Map
3oge3ogeC 3ogyC 3oh5Y 3oh7YContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_K 117_A 1.02 0.02
6_H 136_Q 0.94 0.01
64_E 13_G 0.93 0.01
47_K 150_K 0.89 0.01
105_A 163_A 0.89 0.01
89_F 99_V 0.88 0.01
17_S 28_Q 0.87 0.01
50_R 38_R 0.83 0.01
57_Q 161_E 0.82 0.01
6_H 123_Q 0.82 0.01
80_G 142_M 0.80 0.01
14_L 29_Y 0.80 0.01
23_R 16_R 0.76 0.01
32_P 88_R 0.76 0.01
67_L 106_V 0.75 0.01
72_V 64_V 0.75 0.01
50_R 150_K 0.73 0.01
10_G 5_I 0.72 0.01
44_I 15_T 0.72 0.01
28_K 185_G 0.72 0.01
51_V 125_E 0.69 0.01
47_K 68_V 0.69 0.01
23_R 85_R 0.69 0.01
67_L 90_E 0.68 0.01
72_V 75_V 0.68 0.01
65_A 18_W 0.68 0.01
23_R 66_V 0.67 0.01
86_R 129_A 0.67 0.01
103_G 101_L 0.67 0.01
9_K 21_R 0.66 0.01
27_V 43_L 0.66 0.01
41_G 139_Q 0.65 0.01
84_R 165_T 0.65 0.01
105_A 23_Y 0.65 0.01
82_P 181_N 0.65 0.01
30_V 75_V 0.65 0.01
59_G 77_I 0.65 0.01
53_P 39_I 0.64 0.01
8_K 19_E 0.64 0.01
61_I 160_A 0.64 0.01
66_P 91_L 0.63 0.01
56_P 96_G 0.63 0.01
59_G 146_A 0.63 0.01
75_I 65_A 0.63 0.01
74_P 29_Y 0.63 0.01
69_A 88_R 0.62 0.01
80_G 43_L 0.62 0.01
48_A 181_N 0.61 0.01
99_C 129_A 0.61 0.01
16_A 65_A 0.61 0.01
94_K 45_K 0.61 0.01
49_V 28_Q 0.61 0.01
71_K 108_N 0.60 0.01
28_K 121_A 0.60 0.01
50_R 163_A 0.60 0.01
83_T 129_A 0.60 0.01
7_V 136_Q 0.60 0.01
104_G 122_E 0.60 0.01
73_R 141_V 0.60 0.01
85_V 71_A 0.60 0.00
29_E 198_V 0.59 0.00
75_I 162_Q 0.59 0.00
98_V 149_A 0.59 0.00
79_C 185_G 0.59 0.00
66_P 50_A 0.58 0.00
62_E 154_S 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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