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OPENSEQ.org
L24 - L27
UniProt: Q5SHP9 - P60493
Length: 195
Sequences: 1336
Seq/Len: 7.22
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dY0 3v2fY0Contact Map
2j002j01Y0 2j03Y0Contact Map
4juw4juxY0Contact Map
4kix4kixUW 4kizUW 4kj1UW 4kj3UWContact Map
4kj54kj5UW 4kj7UW 4kj9UW 4kjbUWContact Map
2zjr2zjrRTContact Map
4btc4btdY0Contact Map
3uyd3uyeU3 3uygU3Contact Map
4gd13r8sUW 3r8tUWContact Map
3knh3kniY0 3knkY0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
56_P 7_L 0.62 0.00
10_G 41_R 0.61 0.00
67_L 6_G 0.60 0.00
95_K 27_E 0.60 0.00
62_E 45_F 0.59 0.00
36_A 17_Q 0.58 0.00
24_V 3_H 0.57 0.00
36_A 44_R 0.57 0.00
100_A 17_Q 0.56 0.00
43_N 19_K 0.56 0.00
40_E 4_K 0.55 0.00
61_I 64_D 0.55 0.00
48_A 9_S 0.55 0.00
80_G 6_G 0.54 0.00
67_L 55_R 0.53 0.00
77_P 76_G 0.52 0.00
32_P 19_K 0.51 0.00
5_M 1_M 0.51 0.00
85_V 79_V 0.50 0.00
101_K 73_G 0.50 0.00
56_P 6_G 0.50 0.00
77_P 62_L 0.49 0.00
26_K 35_N 0.49 0.00
37_V 77_R 0.49 0.00
51_V 45_F 0.49 0.00
72_V 45_F 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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