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OPENSEQ.org
L14 - L35
UniProt: Q5SHP8 - Q5SKU1
Length: 187
Sequences: 830
Seq/Len: 4.46
I_Prob: 0.12
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dO8 3v2fO8Contact Map
2j002j01O8 2j03O8Contact Map
4juw4juxO8Contact Map
4kix4kixK3 4kizK3 4kj1K3 4kj3K3Contact Map
4kj54kj5K3 4kj7K3 4kj9K3 4kjbK3Contact Map
2zjr2zjrH3Contact Map
4btc4btdO8Contact Map
3uyd3uyeN8 3uygN8Contact Map
4gd13r8sK3 3r8tK3Contact Map
3ohc3ohjO8 3ohkO8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
84_A 61_L 1.14 0.12
115_V 57_R 1.12 0.12
62_V 10_A 0.99 0.08
115_V 54_E 0.92 0.06
81_D 30_R 0.90 0.06
56_D 30_R 0.89 0.06
60_A 10_A 0.85 0.05
113_K 30_R 0.84 0.04
14_T 7_H 0.79 0.04
32_Y 10_A 0.76 0.03
92_E 30_R 0.76 0.03
43_V 60_L 0.74 0.03
21_C 33_N 0.74 0.03
102_V 17_T 0.74 0.03
113_K 33_N 0.74 0.03
78_R 15_K 0.73 0.03
14_T 21_K 0.73 0.03
5_Q 41_I 0.73 0.03
9_E 7_H 0.72 0.03
23_R 45_G 0.72 0.03
35_V 55_A 0.72 0.03
38_V 29_K 0.71 0.03
62_V 21_K 0.71 0.03
111_F 32_L 0.70 0.03
42_S 7_H 0.70 0.03
54_E 14_V 0.70 0.03
88_N 33_N 0.68 0.03
41_A 53_P 0.68 0.02
65_T 41_I 0.68 0.02
78_R 37_S 0.67 0.02
4_P 28_G 0.66 0.02
96_T 15_K 0.66 0.02
65_T 62_L 0.66 0.02
108_E 63_P 0.65 0.02
41_A 64_Y 0.65 0.02
108_E 57_R 0.64 0.02
5_Q 29_K 0.64 0.02
14_T 14_V 0.64 0.02
106_L 63_P 0.63 0.02
89_N 58_I 0.62 0.02
38_V 16_I 0.62 0.02
21_C 26_K 0.62 0.02
17_R 18_A 0.62 0.02
30_A 28_G 0.62 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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