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OPENSEQ.org
L14 - S15
UniProt: Q5SHP8 - Q5SJ76
Length: 211
Sequences: 1102
Seq/Len: 5.22
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2dO 3v2eO 3v2fOContact Map
2j002j00O 2j01O 2j02O 2j03OContact Map
4juw4juwO 4juxOContact Map
4kix4kixK 4kiyO 4kizK 4kj0O 4kj1K 4kj2O 4kj3K 4kj4OContact Map
4kj54kj5K 4kj6O 4kj7K 4kj8O 4kj9K 4kjaO 4kjbK 4kjcOContact Map
3knh3knhO 3kniO 3knjO 3knkOContact Map
3ohc3ohcO 3ohdO 3ohjO 3ohkOContact Map
3uz63uz6R 3uz7R 3uz8N 3uz9NContact Map
3oge3ogeO 3ogyO 3oh5O 3oh7OContact Map
3uyd3uydR 3uyeN 3uyfR 3uygNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
110_G 58_M 0.91 0.01
78_R 3_I 0.90 0.01
92_E 35_R 0.89 0.01
14_T 89_G 0.89 0.01
115_V 9_Q 0.84 0.01
92_E 59_M 0.82 0.01
4_P 43_L 0.80 0.01
29_N 14_E 0.78 0.01
6_T 47_K 0.78 0.01
78_R 2_P 0.76 0.01
113_K 89_G 0.76 0.01
14_T 53_H 0.75 0.00
102_V 77_R 0.75 0.00
113_K 48_K 0.75 0.00
17_R 61_G 0.74 0.00
14_T 11_V 0.73 0.00
81_D 2_P 0.73 0.00
33_A 79_R 0.72 0.00
45_E 40_S 0.72 0.00
32_Y 3_I 0.71 0.00
19_I 16_A 0.71 0.00
75_S 89_G 0.68 0.00
8_L 81_L 0.68 0.00
17_R 73_E 0.67 0.00
92_E 2_P 0.67 0.00
27_G 82_I 0.66 0.00
122_L 72_R 0.65 0.00
76_A 2_P 0.64 0.00
108_E 70_L 0.64 0.00
49_R 15_F 0.64 0.00
111_F 50_H 0.64 0.00
28_S 60_V 0.63 0.00
58_V 32_L 0.63 0.00
83_A 38_R 0.62 0.00
43_V 19_P 0.62 0.00
106_L 88_R 0.61 0.00
84_A 53_H 0.61 0.00
42_S 57_L 0.61 0.00
67_K 79_R 0.61 0.00
52_V 27_V 0.61 0.00
115_V 68_R 0.60 0.00
49_R 81_L 0.60 0.00
56_D 9_Q 0.59 0.00
89_N 72_R 0.59 0.00
24_V 50_H 0.59 0.00
25_L 6_E 0.59 0.00
73_D 51_H 0.59 0.00
80_D 15_F 0.59 0.00
38_V 71_Q 0.59 0.00
81_D 20_G 0.59 0.00
29_N 17_R 0.59 0.00
29_N 47_K 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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