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OPENSEQ.org
L14 - L25
UniProt: Q5SHP8 - Q5SHZ1
Length: 328
Sequences: 1173
Seq/Len: 3.83
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dOZ 3v2fOZContact Map
2j002j01OZ 2j03OZContact Map
4juw4juxOZContact Map
4kix4kixKV 4kizKV 4kj1KV 4kj3KVContact Map
4kj54kj5KV 4kj7KV 4kj9KV 4kjbKVContact Map
2zjr2zjrHSContact Map
4btc4btdOZContact Map
3uyd3uyeNV 3uygNVContact Map
4gd13r8sKV 3r8tKVContact Map
3knh3kniOZ 3knkOZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
2_I 100_V 0.96 0.01
41_A 46_K 0.87 0.01
92_E 76_L 0.87 0.01
6_T 66_S 0.86 0.01
92_E 101_P 0.84 0.01
14_T 46_K 0.82 0.01
89_N 80_R 0.82 0.01
75_S 15_P 0.79 0.01
111_F 130_P 0.79 0.01
45_E 13_E 0.78 0.01
91_L 5_L 0.78 0.01
78_R 122_R 0.78 0.01
6_T 117_L 0.77 0.01
86_I 33_L 0.76 0.01
32_Y 28_M 0.74 0.01
86_I 5_L 0.74 0.01
75_S 34_N 0.74 0.01
17_R 111_V 0.74 0.01
87_I 122_R 0.72 0.01
115_V 22_G 0.72 0.01
30_A 134_P 0.72 0.01
45_E 106_G 0.71 0.00
31_K 3_Y 0.70 0.00
76_A 106_G 0.70 0.00
6_T 58_V 0.69 0.00
56_D 40_D 0.68 0.00
65_T 126_V 0.68 0.00
75_S 7_A 0.68 0.00
6_T 111_V 0.67 0.00
42_S 86_V 0.66 0.00
18_K 163_L 0.66 0.00
17_R 164_A 0.65 0.00
6_T 21_A 0.65 0.00
23_R 37_V 0.65 0.00
86_I 26_G 0.65 0.00
52_V 153_S 0.65 0.00
115_V 2_E 0.64 0.00
56_D 94_E 0.64 0.00
98_V 17_A 0.64 0.00
75_S 144_L 0.64 0.00
20_M 73_Q 0.64 0.00
45_E 94_E 0.64 0.00
30_A 160_G 0.64 0.00
17_R 170_T 0.64 0.00
111_F 92_S 0.64 0.00
39_I 167_P 0.63 0.00
42_S 79_R 0.63 0.00
91_L 74_V 0.63 0.00
66_K 48_F 0.62 0.00
73_D 7_A 0.62 0.00
9_E 169_E 0.62 0.00
39_I 31_R 0.62 0.00
103_A 129_S 0.61 0.00
111_F 95_P 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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