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OPENSEQ.org
L14 - L22
UniProt: Q5SHP8 - Q5SHP3
Length: 235
Sequences: 1314
Seq/Len: 5.64
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dOW 3v2fOWContact Map
1yj91yj9KRContact Map
2j002j01OW 2j03OWContact Map
4juw4juxOWContact Map
4kix4kixKS 4kizKS 4kj1KS 4kj3KSContact Map
4kj54kj5KS 4kj7KS 4kj9KS 4kjbKSContact Map
2zjr2zjrHPContact Map
4btc4btdOWContact Map
3uyd3uyeNS 3uygNSContact Map
4gd13r8sKS 3r8tKSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_A 60_N 0.85 0.00
25_L 65_L 0.78 0.00
115_V 51_L 0.76 0.00
6_T 86_L 0.74 0.00
45_E 94_D 0.72 0.00
29_N 63_D 0.72 0.00
32_Y 85_V 0.72 0.00
29_N 94_D 0.68 0.00
96_T 3_A 0.68 0.00
57_V 109_E 0.67 0.00
86_I 4_K 0.66 0.00
77_I 25_R 0.65 0.00
73_D 76_V 0.65 0.00
41_A 11_R 0.65 0.00
112_M 21_V 0.65 0.00
84_A 30_E 0.65 0.00
109_K 90_R 0.62 0.00
54_E 2_E 0.62 0.00
29_N 62_H 0.61 0.00
63_V 37_R 0.61 0.00
111_F 39_T 0.60 0.00
93_P 2_E 0.59 0.00
57_V 99_R 0.59 0.00
47_I 35_I 0.59 0.00
68_E 105_V 0.59 0.00
98_V 20_V 0.59 0.00
110_G 60_N 0.58 0.00
117_L 84_R 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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