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OPENSEQ.org
L14 - S19
UniProt: Q5SHP8 - Q5SHP2
Length: 215
Sequences: 1181
Seq/Len: 5.60
I_Prob: 0.26
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cS 3v2dO 3v2eS 3v2fOContact Map
2j002j00S 2j01O 2j02S 2j03OContact Map
4juw4juwS 4juxOContact Map
4kix4kixK 4kiyS 4kizK 4kj0S 4kj1K 4kj2S 4kj3K 4kj4SContact Map
4kj54kj5K 4kj6S 4kj7K 4kj8S 4kj9K 4kjaS 4kjbK 4kjcSContact Map
3ohc3ohcS 3ohdS 3ohjO 3ohkOContact Map
3knh3knhS 3kniO 3knjS 3knkOContact Map
3uz63uz6V 3uz7V 3uz8N 3uz9NContact Map
3oge3ogeS 3ogyS 3oh5O 3oh7OContact Map
3uyd3uydV 3uyeN 3uyfV 3uygNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_T 59_P 1.19 0.26
92_E 44_M 1.18 0.25
63_V 68_G 1.06 0.18
79_F 8_G 0.98 0.14
14_T 86_E 0.98 0.14
17_R 32_K 0.95 0.13
109_K 45_V 0.93 0.12
104_R 83_H 0.93 0.11
106_L 66_M 0.91 0.11
21_C 44_M 0.90 0.10
51_A 65_N 0.90 0.10
40_V 30_L 0.87 0.09
111_F 18_K 0.87 0.09
110_G 86_E 0.82 0.08
94_R 23_N 0.81 0.07
102_V 29_R 0.80 0.07
31_K 32_K 0.79 0.07
94_R 41_V 0.77 0.06
92_E 41_V 0.76 0.06
68_E 65_N 0.76 0.06
90_Q 29_R 0.76 0.06
68_E 55_K 0.75 0.06
29_N 26_G 0.75 0.06
47_I 61_Y 0.74 0.06
92_E 2_P 0.74 0.06
18_K 50_A 0.74 0.06
60_A 51_V 0.74 0.06
92_E 65_N 0.73 0.05
98_V 12_D 0.73 0.05
91_L 52_Y 0.73 0.05
29_N 88_K 0.73 0.05
2_I 2_P 0.72 0.05
84_A 20_L 0.71 0.05
29_N 87_A 0.71 0.05
14_T 11_V 0.70 0.05
62_V 79_T 0.69 0.05
59_K 22_L 0.69 0.04
29_N 21_E 0.69 0.04
68_E 57_H 0.69 0.04
17_R 87_A 0.69 0.04
67_K 2_P 0.68 0.04
29_N 23_N 0.68 0.04
81_D 86_E 0.68 0.04
92_E 55_K 0.68 0.04
110_G 26_G 0.67 0.04
120_E 15_L 0.67 0.04
89_N 41_V 0.67 0.04
65_T 5_L 0.66 0.04
81_D 60_V 0.66 0.04
91_L 86_E 0.66 0.04
42_S 89_A 0.66 0.04
63_V 67_V 0.66 0.04
47_I 2_P 0.66 0.04
33_A 85_K 0.65 0.04
66_K 2_P 0.65 0.04
96_T 34_W 0.65 0.04
17_R 71_L 0.64 0.04
72_P 16_L 0.64 0.04
8_L 60_V 0.64 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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