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OPENSEQ.org
L14 - S09
UniProt: Q5SHP8 - P80374
Length: 250
Sequences: 1232
Seq/Len: 4.97
I_Prob: 0.41
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dO 3v2eI 3v2fOContact Map
2j002j00I 2j01O 2j02I 2j03OContact Map
4juw4juwI 4juxOContact Map
4kix4kixK 4kiyI 4kizK 4kj0I 4kj1K 4kj2I 4kj3K 4kj4IContact Map
4kj54kj5K 4kj6I 4kj7K 4kj8I 4kj9K 4kjaI 4kjbK 4kjcIContact Map
3knh3knhI 3kniO 3knjI 3knkOContact Map
3ohc3ohcI 3ohdI 3ohjO 3ohkOContact Map
3uz63uz6L 3uz7L 3uz8N 3uz9NContact Map
3u5b3u5cQ 3u5eV 3u5gQ 3u5iVContact Map
3oge3ogeI 3ogyI 3oh5O 3oh7OContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
73_D 37_F 1.26 0.41
77_I 59_F 0.98 0.19
110_G 98_P 0.91 0.15
103_A 55_A 0.85 0.12
17_R 90_P 0.83 0.11
70_K 16_R 0.83 0.11
114_I 8_G 0.83 0.11
14_T 116_K 0.83 0.11
45_E 92_Y 0.82 0.10
109_K 114_Y 0.81 0.10
102_V 12_E 0.80 0.10
62_V 108_V 0.78 0.09
81_D 40_L 0.78 0.09
69_I 13_A 0.75 0.08
111_F 12_E 0.75 0.08
14_T 3_Q 0.75 0.08
43_V 14_V 0.75 0.08
66_K 66_R 0.74 0.08
111_F 27_T 0.73 0.07
14_T 64_T 0.73 0.07
40_V 114_Y 0.72 0.07
110_G 42_R 0.71 0.07
83_A 121_R 0.71 0.07
113_K 32_D 0.70 0.07
51_A 70_K 0.70 0.06
91_L 98_P 0.70 0.06
6_T 28_V 0.69 0.06
72_P 91_D 0.69 0.06
19_I 117_H 0.68 0.06
47_I 32_D 0.68 0.06
67_K 28_V 0.68 0.06
86_I 98_P 0.67 0.06
28_S 40_L 0.66 0.05
84_A 70_K 0.66 0.05
6_T 31_Q 0.66 0.05
53_K 61_A 0.66 0.05
67_K 12_E 0.65 0.05
72_P 56_L 0.65 0.05
67_K 40_L 0.65 0.05
81_D 116_K 0.65 0.05
98_V 36_Y 0.65 0.05
17_R 58_H 0.64 0.05
68_E 13_A 0.64 0.05
62_V 63_I 0.63 0.05
110_G 33_F 0.63 0.04
56_D 27_T 0.62 0.04
21_C 101_F 0.62 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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