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OPENSEQ.org
L14 - L34
UniProt: Q5SHP8 - P80340
Length: 171
Sequences: 576
Seq/Len: 3.45
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dO7 3v2fO7Contact Map
2j002j01O7 2j03O7Contact Map
4juw4juxO7Contact Map
4kix4kixK2 4kizK2 4kj1K2 4kj3K2Contact Map
4kj54kj5K2 4kj7K2 4kj9K2 4kjbK2Contact Map
2zjr2zjrH2Contact Map
4btc4btdO7Contact Map
3uyd3uyeN7 3uygN7Contact Map
4gd13r8sK2 3r8tK2Contact Map
3ohc3ohjO7 3ohkO7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
31_K 5_W 1.03 0.02
25_L 3_R 1.02 0.02
96_T 16_H 0.88 0.01
43_V 13_A 0.87 0.01
84_A 45_A 0.86 0.01
62_V 29_K 0.81 0.01
58_V 10_R 0.80 0.01
6_T 1_M 0.78 0.01
92_E 8_N 0.78 0.01
80_D 24_T 0.77 0.01
11_A 12_R 0.75 0.01
75_S 2_K 0.74 0.01
115_V 9_R 0.74 0.01
76_A 10_R 0.73 0.01
122_L 19_R 0.73 0.01
66_K 10_R 0.71 0.01
75_S 7_P 0.71 0.01
83_A 37_K 0.71 0.01
72_P 25_P 0.70 0.01
34_T 15_T 0.70 0.01
84_A 13_A 0.69 0.01
83_A 19_R 0.69 0.01
80_D 12_R 0.68 0.01
70_K 5_W 0.68 0.01
38_V 43_T 0.67 0.01
23_R 14_K 0.67 0.01
41_A 8_N 0.67 0.01
117_L 4_T 0.67 0.01
51_A 8_N 0.67 0.01
75_S 5_W 0.66 0.01
77_I 26_G 0.66 0.01
55_G 7_P 0.66 0.01
77_I 16_H 0.65 0.01
110_G 13_A 0.65 0.01
66_K 43_T 0.65 0.01
92_E 15_T 0.65 0.01
42_S 16_H 0.64 0.01
94_R 10_R 0.64 0.01
7_Y 29_K 0.64 0.01
33_A 12_R 0.63 0.01
87_I 15_T 0.63 0.01
73_D 5_W 0.62 0.01
32_Y 44_P 0.62 0.01
73_D 7_P 0.62 0.01
113_K 23_R 0.62 0.01
49_R 36_Q 0.62 0.01
59_K 19_R 0.62 0.01
63_V 33_R 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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