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OPENSEQ.org
L14 - L27
UniProt: Q5SHP8 - P60493
Length: 207
Sequences: 982
Seq/Len: 4.77
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dO0 3v2fO0Contact Map
2j002j01O0 2j03O0Contact Map
4juw4juxO0Contact Map
4kix4kixKW 4kizKW 4kj1KW 4kj3KWContact Map
4kj54kj5KW 4kj7KW 4kj9KW 4kjbKWContact Map
2zjr2zjrHTContact Map
4btc4btdO0Contact Map
3uyd3uyeN3 3uygN3Contact Map
4gd13r8sKW 3r8tKWContact Map
3knh3kniO0 3knkO0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_A 41_R 0.90 0.01
93_P 60_F 0.87 0.01
91_L 19_K 0.85 0.01
86_I 25_R 0.83 0.01
17_R 73_G 0.82 0.01
14_T 70_Q 0.78 0.00
53_K 1_M 0.77 0.00
66_K 49_K 0.77 0.00
67_K 47_P 0.77 0.00
88_N 8_G 0.76 0.00
28_S 11_R 0.75 0.00
106_L 13_G 0.75 0.00
11_A 51_V 0.75 0.00
41_A 81_V 0.73 0.00
77_I 9_S 0.73 0.00
42_S 84_L 0.72 0.00
111_F 44_R 0.71 0.00
29_N 30_V 0.71 0.00
55_G 10_T 0.70 0.00
115_V 62_L 0.70 0.00
94_R 6_G 0.70 0.00
24_V 63_V 0.69 0.00
91_L 25_R 0.67 0.00
110_G 7_L 0.67 0.00
14_T 78_Y 0.67 0.00
58_V 7_L 0.66 0.00
88_N 3_H 0.65 0.00
122_L 35_N 0.64 0.00
109_K 83_P 0.64 0.00
90_Q 55_R 0.64 0.00
66_K 55_R 0.63 0.00
56_D 61_A 0.63 0.00
78_R 76_G 0.63 0.00
87_I 78_Y 0.62 0.00
98_V 4_K 0.62 0.00
101_P 61_A 0.60 0.00
88_N 7_L 0.59 0.00
41_A 53_M 0.59 0.00
53_K 11_R 0.59 0.00
68_E 73_G 0.59 0.00
98_V 71_D 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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