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OPENSEQ.org
L14 - L20
UniProt: Q5SHP8 - P60491
Length: 240
Sequences: 1057
Seq/Len: 4.42
I_Prob: 0.40
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dOU 3v2fOUContact Map
2j002j01OU 2j03OUContact Map
4juw4juxOUContact Map
4kix4kixKQ 4kizKQ 4kj1KQ 4kj3KQContact Map
4kj54kj5KQ 4kj7KQ 4kj9KQ 4kjbKQContact Map
2zjr2zjrHNContact Map
4btc4btdOUContact Map
3uyd3uyeN1 3uygN1Contact Map
4gd13r8sKQ 3r8tKQContact Map
3knh3kniOU 3knkOUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
92_E 40_F 1.27 0.40
32_Y 28_R 1.17 0.31
57_V 77_S 1.08 0.24
6_T 107_A 0.92 0.14
110_G 91_D 0.87 0.12
115_V 41_A 0.84 0.11
78_R 12_R 0.80 0.09
94_R 91_D 0.80 0.09
103_A 37_E 0.80 0.09
47_I 40_F 0.78 0.08
14_T 40_F 0.78 0.08
29_N 53_R 0.78 0.08
19_I 34_K 0.77 0.08
87_I 83_L 0.76 0.08
45_E 90_V 0.76 0.08
98_V 51_K 0.76 0.08
101_P 35_A 0.76 0.08
110_G 88_I 0.75 0.07
73_D 100_V 0.73 0.07
98_V 82_G 0.73 0.07
14_T 57_F 0.72 0.07
115_V 89_E 0.72 0.07
81_D 109_L 0.72 0.06
115_V 72_H 0.71 0.06
84_A 6_T 0.70 0.06
87_I 93_K 0.70 0.06
38_V 59_R 0.70 0.06
47_I 91_D 0.67 0.05
51_A 14_H 0.67 0.05
7_Y 75_N 0.66 0.05
7_Y 66_N 0.66 0.05
81_D 72_H 0.66 0.05
51_A 91_D 0.66 0.05
110_G 41_A 0.65 0.05
68_E 43_G 0.65 0.05
22_I 65_I 0.64 0.04
29_N 16_K 0.64 0.04
48_P 5_K 0.64 0.04
21_C 43_G 0.64 0.04
38_V 83_L 0.63 0.04
49_R 91_D 0.63 0.04
29_N 27_L 0.63 0.04
45_E 80_I 0.62 0.04
98_V 28_R 0.62 0.04
100_G 95_L 0.61 0.04
96_T 5_K 0.61 0.04
122_L 93_K 0.61 0.04
86_I 72_H 0.61 0.04
86_I 93_K 0.60 0.04
47_I 11_R 0.60 0.04
90_Q 20_L 0.60 0.04
5_Q 26_G 0.60 0.04
94_R 14_H 0.60 0.04
14_T 75_N 0.59 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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