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OPENSEQ.org
L14 - L33
UniProt: Q5SHP8 - P35871
Length: 176
Sequences: 762
Seq/Len: 4.38
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dO6 3v2fO6Contact Map
2j002j01O6 2j03O6Contact Map
4juw4juxO6Contact Map
4kix4kixK1 4kizK1 4kj1K1 4kj3K1Contact Map
4kj54kj5K1 4kj7K1 4kj9K1 4kjbK1Contact Map
2zjr2zjrH1Contact Map
4btc4btdO6Contact Map
3uyd3uyeN6 3uygN6Contact Map
4gd13r8sK1 3r8tK1Contact Map
3knh3kniO6 3knkO6Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
43_V 29_N 0.78 0.00
42_S 7_I 0.76 0.00
17_R 12_E 0.74 0.00
68_E 8_K 0.74 0.00
32_Y 6_R 0.74 0.00
17_R 28_R 0.73 0.00
104_R 33_K 0.72 0.00
75_S 32_N 0.71 0.00
57_V 34_L 0.71 0.00
14_T 30_T 0.70 0.00
39_I 29_N 0.69 0.00
72_P 37_R 0.68 0.00
57_V 5_V 0.65 0.00
88_N 12_E 0.64 0.00
78_R 48_V 0.63 0.00
30_A 9_L 0.62 0.00
111_F 29_N 0.61 0.00
96_T 6_R 0.61 0.00
69_I 44_R 0.60 0.00
72_P 34_L 0.60 0.00
39_I 11_L 0.60 0.00
32_Y 23_T 0.59 0.00
111_F 35_E 0.59 0.00
52_V 15_E 0.59 0.00
84_A 7_I 0.59 0.00
90_Q 54_I 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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