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OPENSEQ.org
L14 - S07
UniProt: Q5SHP8 - P17291
Length: 278
Sequences: 1177
Seq/Len: 4.23
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cG 3v2dO 3v2eG 3v2fOContact Map
2j002j00G 2j01O 2j02G 2j03OContact Map
4juw4juwG 4juxOContact Map
4kix4kixK 4kiyG 4kizK 4kj0G 4kj1K 4kj2G 4kj3K 4kj4GContact Map
4kj54kj5K 4kj6G 4kj7K 4kj8G 4kj9K 4kjaG 4kjbK 4kjcGContact Map
3ohc3ohcG 3ohdG 3ohjO 3ohkOContact Map
3knh3knhG 3kniO 3knjG 3knkOContact Map
3uz63uz6J 3uz7J 3uz8N 3uz9NContact Map
3oge3ogeG 3ogyG 3oh5O 3oh7OContact Map
3uyd3uydJ 3uyeN 3uyfJ 3uygNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
94_R 11_Q 1.01 0.02
109_K 143_R 1.00 0.02
92_E 131_K 0.98 0.02
113_K 56_Q 0.91 0.02
94_R 131_K 0.91 0.02
19_I 27_I 0.90 0.01
56_D 105_V 0.90 0.01
98_V 130_G 0.89 0.01
47_I 67_E 0.87 0.01
57_V 139_E 0.87 0.01
111_F 149_R 0.85 0.01
110_G 70_K 0.83 0.01
17_R 64_Q 0.80 0.01
16_A 127_A 0.79 0.01
111_F 98_S 0.79 0.01
19_I 152_A 0.77 0.01
20_M 4_R 0.77 0.01
56_D 143_R 0.74 0.01
19_I 72_R 0.73 0.01
78_R 109_N 0.73 0.01
91_L 72_R 0.73 0.01
56_D 115_R 0.73 0.01
88_N 108_A 0.72 0.01
81_D 156_W 0.72 0.01
72_P 58_P 0.72 0.01
45_E 8_E 0.72 0.01
29_N 6_R 0.72 0.01
91_L 49_I 0.72 0.01
108_E 11_Q 0.71 0.01
68_E 30_I 0.71 0.01
110_G 156_W 0.70 0.01
113_K 109_N 0.70 0.01
117_L 147_A 0.70 0.01
88_N 17_V 0.70 0.01
27_G 62_F 0.69 0.01
31_K 23_V 0.69 0.01
120_E 80_V 0.69 0.01
97_R 148_N 0.69 0.01
42_S 4_R 0.68 0.01
90_Q 8_E 0.68 0.01
109_K 53_K 0.68 0.01
38_V 8_E 0.68 0.01
66_K 6_R 0.68 0.01
90_Q 124_L 0.68 0.01
32_Y 59_L 0.67 0.01
121_V 78_R 0.67 0.01
117_L 103_W 0.67 0.01
101_P 90_E 0.67 0.01
83_A 107_A 0.67 0.01
108_E 149_R 0.67 0.01
77_I 20_D 0.67 0.01
97_R 34_G 0.66 0.01
35_V 8_E 0.66 0.01
86_I 147_A 0.66 0.01
57_V 137_K 0.66 0.01
23_R 113_E 0.66 0.01
51_A 131_K 0.66 0.01
73_D 75_V 0.66 0.01
5_Q 130_G 0.65 0.01
84_A 45_D 0.65 0.01
33_A 62_F 0.64 0.01
85_V 42_I 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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