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OPENSEQ.org
L29 - S18
UniProt: Q5SHP6 - Q5SLQ0
Length: 160
Sequences: 973
Seq/Len: 7.37
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2d2 3v2eR 3v2f2Contact Map
2j002j00R 2j012 2j02R 2j032Contact Map
4kix4kixY 4kiyR 4kizY 4kj0R 4kj1Y 4kj2R 4kj3Y 4kj4RContact Map
4kj54kj5Y 4kj6R 4kj7Y 4kj8R 4kj9Y 4kjaR 4kjbY 4kjcRContact Map
3knh3knhR 3kni2 3knjR 3knk2Contact Map
3ohc3ohcR 3ohdR 3ohj2 3ohk2Contact Map
3uz63uz6U 3uz7U 3uz8W 3uz9WContact Map
3oge3ogeR 3ogyR 3oh52 3oh72Contact Map
3uyd3uydU 3uyeW 3uyfU 3uygWContact Map
3ohy3ohyR 3ohz2 3oi0R 3oi12Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_L 53_R 0.98 0.02
31_E 45_S 0.84 0.01
34_E 19_K 0.84 0.01
29_K 45_S 0.82 0.01
36_R 64_R 0.81 0.01
64_L 31_L 0.74 0.01
67_K 23_K 0.73 0.01
42_G 48_G 0.70 0.01
39_A 67_A 0.70 0.01
42_G 75_I 0.68 0.01
51_R 61_K 0.68 0.01
54_K 17_S 0.67 0.01
49_K 42_R 0.66 0.01
41_I 20_A 0.66 0.01
40_S 36_N 0.65 0.01
19_V 20_A 0.65 0.01
36_R 73_A 0.64 0.01
28_K 46_E 0.64 0.01
43_Q 67_A 0.64 0.01
11_E 76_L 0.63 0.01
20_E 61_K 0.63 0.01
48_H 38_E 0.62 0.01
59_R 83_E 0.62 0.01
8_K 41_K 0.62 0.01
71_N 58_L 0.61 0.01
46_Q 47_T 0.61 0.01
54_K 38_E 0.60 0.01
13_A 26_L 0.60 0.01
16_L 53_R 0.60 0.01
51_R 48_G 0.60 0.01
22_E 37_V 0.59 0.01
36_R 76_L 0.59 0.01
47_N 60_A 0.59 0.01
14_R 25_T 0.58 0.01
65_N 50_I 0.58 0.01
31_E 53_R 0.58 0.01
45_S 24_A 0.58 0.01
24_L 36_N 0.57 0.01
36_R 43_F 0.57 0.01
25_V 23_K 0.57 0.01
31_E 43_F 0.57 0.01
66_E 79_L 0.56 0.01
61_L 79_L 0.56 0.01
54_K 80_P 0.56 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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