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OPENSEQ.org
L29 - S06
UniProt: Q5SHP6 - Q5SLP8
Length: 173
Sequences: 1132
Seq/Len: 6.95
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2d2 3v2eF 3v2f2Contact Map
2j002j00F 2j012 2j02F 2j032Contact Map
4juw4juwF 4jux2Contact Map
4kix4kixY 4kiyF 4kizY 4kj0F 4kj1Y 4kj2F 4kj3Y 4kj4FContact Map
4kj54kj5Y 4kj6F 4kj7Y 4kj8F 4kj9Y 4kjaF 4kjbY 4kjcFContact Map
3knh3knhF 3kni2 3knjF 3knk2Contact Map
3ohc3ohcF 3ohdF 3ohj2 3ohk2Contact Map
3uz63uz6I 3uz7I 3uz8W 3uz9WContact Map
3oge3ogeF 3ogyF 3oh52 3oh72Contact Map
3uyd3uydI 3uyeW 3uyfI 3uygWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
54_K 76_A 0.85 0.00
54_K 78_E 0.82 0.00
57_I 81_I 0.78 0.00
31_E 9_V 0.77 0.00
57_I 75_L 0.75 0.00
67_K 90_V 0.73 0.00
50_I 27_Q 0.72 0.00
70_Q 30_L 0.69 0.00
60_L 31_E 0.68 0.00
63_V 12_P 0.68 0.00
64_L 82_R 0.68 0.00
11_E 20_A 0.67 0.00
34_E 88_V 0.65 0.00
38_Q 83_D 0.65 0.00
54_K 93_S 0.64 0.00
31_E 77_R 0.64 0.00
70_Q 14_L 0.63 0.00
56_Q 85_V 0.63 0.00
56_Q 67_M 0.63 0.00
32_L 58_G 0.62 0.00
9_Q 62_W 0.62 0.00
15_K 10_L 0.61 0.00
64_L 60_F 0.61 0.00
45_S 73_N 0.61 0.00
10_L 70_D 0.61 0.00
56_Q 46_R 0.61 0.00
63_V 35_A 0.60 0.00
28_K 7_N 0.59 0.00
28_K 94_Q 0.59 0.00
31_E 74_D 0.59 0.00
51_R 89_M 0.58 0.00
13_A 49_A 0.58 0.00
54_K 34_G 0.58 0.00
41_I 67_M 0.58 0.00
36_R 61_L 0.57 0.00
65_N 78_E 0.57 0.00
9_Q 7_N 0.57 0.00
24_L 37_V 0.57 0.00
65_N 40_V 0.56 0.00
17_S 56_P 0.56 0.00
52_D 80_R 0.56 0.00
25_V 8_I 0.56 0.00
68_R 68_P 0.55 0.00
59_R 74_D 0.55 0.00
34_E 94_Q 0.55 0.00
60_L 43_L 0.55 0.00
56_Q 83_D 0.55 0.00
64_L 6_V 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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