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OPENSEQ.org
L29 - L35
UniProt: Q5SHP6 - Q5SKU1
Length: 137
Sequences: 1079
Seq/Len: 8.43
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d28 3v2f28Contact Map
2j002j0128 2j0328Contact Map
4juw4jux28Contact Map
4kix4kixY3 4kizY3 4kj1Y3 4kj3Y3Contact Map
4kj54kj5Y3 4kj7Y3 4kj9Y3 4kjbY3Contact Map
2zjr2zjrV3Contact Map
4btc4btd28Contact Map
3uyd3uyeW8 3uygW8Contact Map
4gd13r8sY3 3r8tY3Contact Map
3ohc3ohj28 3ohk28Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
42_G 54_E 0.92 0.01
36_R 57_R 0.74 0.01
13_A 29_K 0.73 0.01
65_N 19_S 0.70 0.01
62_T 4_M 0.70 0.01
51_R 49_V 0.68 0.01
50_I 60_L 0.67 0.01
41_I 11_K 0.64 0.01
45_S 49_V 0.62 0.00
40_S 28_G 0.61 0.00
29_K 34_W 0.61 0.00
28_K 63_P 0.60 0.00
25_V 14_V 0.59 0.00
31_E 56_E 0.58 0.00
50_I 41_I 0.58 0.00
26_R 8_K 0.57 0.00
55_R 50_L 0.57 0.00
59_R 39_K 0.57 0.00
15_K 50_L 0.56 0.00
44_L 56_E 0.56 0.00
23_K 22_V 0.56 0.00
27_E 9_G 0.55 0.00
37_F 57_R 0.55 0.00
61_L 7_H 0.55 0.00
50_I 53_P 0.55 0.00
67_K 54_E 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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