OPENSEQ.org
L29 - L31
UniProt: Q5SHP6 - Q5SJE1
Length: 143
Sequences: 1153
Seq/Len: 8.94
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d24 3v2f24Contact Map
2j002j0124 2j0324Contact Map
4juw4jux24Contact Map
4btc4btd24Contact Map
3uyd3uyeW4 3uygW4Contact Map
3knh3kni24 3knk24Contact Map
3ohc3ohj24 3ohk24Contact Map
3ohy3ohz24 3oi124Contact Map
3v223v2324 3v2524Contact Map
3uz63uz8W4 3uz9W4Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_P 56_V 0.84 0.00
41_I 55_R 0.80 0.00
31_E 48_R 0.80 0.00
61_L 62_R 0.78 0.00
24_L 32_Y 0.78 0.00
32_L 28_K 0.75 0.00
59_R 19_G 0.67 0.00
48_H 48_R 0.65 0.00
60_L 53_E 0.64 0.00
56_Q 51_D 0.64 0.00
28_K 31_I 0.63 0.00
54_K 26_S 0.62 0.00
28_K 12_A 0.62 0.00
11_E 51_D 0.62 0.00
58_A 26_S 0.61 0.00
8_K 57_E 0.59 0.00
49_K 15_I 0.59 0.00
41_I 53_E 0.59 0.00
41_I 34_E 0.58 0.00
46_Q 58_R 0.57 0.00
55_R 43_Y 0.57 0.00
35_L 31_I 0.57 0.00
14_R 60_Q 0.56 0.00
63_V 58_R 0.56 0.00
61_L 12_A 0.56 0.00
23_K 27_T 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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