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OPENSEQ.org
L29 - S05
UniProt: Q5SHP6 - Q5SHQ5
Length: 234
Sequences: 947
Seq/Len: 4.29
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2d2 3v2eE 3v2f2Contact Map
2j002j00E 2j012 2j02E 2j032Contact Map
4juw4juwE 4jux2Contact Map
4kix4kixY 4kiyE 4kizY 4kj0E 4kj1Y 4kj2E 4kj3Y 4kj4EContact Map
4kj54kj5Y 4kj6E 4kj7Y 4kj8E 4kj9Y 4kjaE 4kjbY 4kjcEContact Map
3knh3knhE 3kni2 3knjE 3knk2Contact Map
3ohc3ohcE 3ohdE 3ohj2 3ohk2Contact Map
3uz63uz6H 3uz7H 3uz8W 3uz9WContact Map
3oge3ogeE 3ogyE 3oh52 3oh72Contact Map
3uyd3uydH 3uyeW 3uyfH 3uygWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
30_R 100_V 1.01 0.02
13_A 37_R 1.01 0.02
66_E 157_H 0.98 0.02
20_E 141_Q 0.94 0.02
59_R 8_E 0.90 0.01
39_A 19_M 0.90 0.01
54_K 138_A 0.84 0.01
33_M 20_Q 0.84 0.01
67_K 149_E 0.82 0.01
17_S 111_E 0.80 0.01
55_R 3_E 0.79 0.01
13_A 69_V 0.78 0.01
45_S 8_E 0.77 0.01
37_F 105_V 0.77 0.01
20_E 38_Q 0.75 0.01
18_P 106_P 0.75 0.01
41_I 20_Q 0.75 0.01
47_N 56_Q 0.74 0.01
23_K 109_I 0.74 0.01
65_N 69_V 0.73 0.01
32_L 10_M 0.73 0.01
55_R 84_F 0.72 0.01
26_R 155_E 0.71 0.01
30_R 14_R 0.71 0.01
66_E 8_E 0.71 0.01
33_M 16_T 0.70 0.01
51_R 6_F 0.69 0.01
39_A 143_R 0.68 0.01
56_Q 88_K 0.68 0.01
69_R 109_I 0.68 0.01
25_V 153_K 0.68 0.01
29_K 78_H 0.67 0.01
67_K 70_P 0.67 0.01
49_K 87_S 0.67 0.01
63_V 127_N 0.67 0.01
61_L 131_I 0.66 0.01
15_K 73_N 0.66 0.01
46_Q 13_I 0.66 0.01
41_I 52_P 0.66 0.01
22_E 137_E 0.65 0.01
32_L 77_P 0.65 0.01
15_K 150_R 0.65 0.01
10_L 138_A 0.64 0.01
25_V 101_I 0.64 0.01
50_I 118_I 0.64 0.01
57_I 19_M 0.63 0.01
45_S 86_A 0.63 0.01
22_E 59_G 0.63 0.01
51_R 117_D 0.63 0.01
70_Q 49_P 0.62 0.01
55_R 27_R 0.62 0.01
68_R 157_H 0.62 0.01
11_E 64_R 0.62 0.01
42_G 26_F 0.62 0.01
9_Q 132_A 0.62 0.01
50_I 69_V 0.62 0.01
45_S 87_S 0.61 0.01
17_S 72_Q 0.61 0.01
66_E 81_E 0.61 0.01
53_L 150_R 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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