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OPENSEQ.org
L29 - S14
UniProt: Q5SHP6 - Q5SHQ1
Length: 133
Sequences: 1035
Seq/Len: 8.28
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2d2 3v2eN 3v2f2Contact Map
2j002j00N 2j012 2j02N 2j032Contact Map
4juw4juwN 4jux2Contact Map
3ohc3ohcN 3ohdN 3ohj2 3ohk2Contact Map
3knh3knhN 3kni2 3knjN 3knk2Contact Map
3uz63uz6Q 3uz7Q 3uz8W 3uz9WContact Map
3u5b3u5cd 3u5eh 3u5gd 3u5ihContact Map
3oge3ogeN 3ogyN 3oh52 3oh72Contact Map
3uyd3uydQ 3uyeW 3uyfQ 3uygWContact Map
3ohy3ohyN 3ohz2 3oi0N 3oi12Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_K 49_H 0.98 0.02
17_S 38_G 0.69 0.01
33_M 36_F 0.66 0.01
30_R 37_F 0.66 0.01
25_V 38_G 0.65 0.01
45_S 44_L 0.65 0.01
41_I 36_F 0.62 0.01
67_K 48_A 0.61 0.01
37_F 59_A 0.61 0.01
61_L 42_I 0.60 0.01
28_K 7_I 0.59 0.01
36_R 18_V 0.58 0.01
32_L 49_H 0.58 0.01
34_E 40_C 0.54 0.01
56_Q 34_Y 0.54 0.01
11_E 5_A 0.52 0.01
26_R 56_V 0.51 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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