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OPENSEQ.org
L29 - S17
UniProt: Q5SHP6 - Q5SHP7
Length: 177
Sequences: 1076
Seq/Len: 7.37
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2d2 3v2eQ 3v2f2Contact Map
2j002j00Q 2j012 2j02Q 2j032Contact Map
4juw4juwQ 4jux2Contact Map
4kix4kixY 4kiyQ 4kizY 4kj0Q 4kj1Y 4kj2Q 4kj3Y 4kj4QContact Map
4kj54kj5Y 4kj6Q 4kj7Y 4kj8Q 4kj9Y 4kjaQ 4kjbY 4kjcQContact Map
3ohc3ohcQ 3ohdQ 3ohj2 3ohk2Contact Map
3knh3knhQ 3kni2 3knjQ 3knk2Contact Map
3uz63uz6T 3uz7T 3uz8W 3uz9WContact Map
3oge3ogeQ 3ogyQ 3oh52 3oh72Contact Map
3uyd3uydT 3uyeW 3uyfT 3uygWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_L 4_K 0.96 0.02
33_M 24_E 0.95 0.02
39_A 33_G 0.83 0.01
64_L 26_Q 0.77 0.01
32_L 70_R 0.72 0.01
45_S 71_F 0.70 0.01
34_E 34_K 0.70 0.01
23_K 36_I 0.68 0.01
28_K 31_L 0.68 0.01
55_R 37_K 0.65 0.01
20_E 67_K 0.62 0.01
57_I 61_E 0.61 0.01
46_Q 79_S 0.60 0.01
47_N 67_K 0.59 0.01
26_R 67_K 0.58 0.01
68_R 9_V 0.57 0.01
54_K 54_G 0.57 0.01
37_F 70_R 0.56 0.01
55_R 73_V 0.55 0.01
24_L 50_K 0.55 0.01
36_R 3_K 0.55 0.01
67_K 32_Y 0.54 0.01
20_E 43_L 0.54 0.01
56_Q 25_R 0.54 0.01
39_A 42_Y 0.53 0.00
54_K 80_G 0.53 0.00
42_G 40_K 0.53 0.00
26_R 42_Y 0.52 0.00
55_R 23_V 0.52 0.00
59_R 79_S 0.52 0.00
25_V 81_R 0.51 0.00
63_V 15_M 0.51 0.00
29_K 39_S 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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