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OPENSEQ.org
L22 - S18
UniProt: Q5SHP3 - Q5SLQ0
Length: 201
Sequences: 1030
Seq/Len: 5.75
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dW 3v2eR 3v2fWContact Map
2j002j00R 2j01W 2j02R 2j03WContact Map
4juw4juwR 4juxWContact Map
4kix4kixS 4kiyR 4kizS 4kj0R 4kj1S 4kj2R 4kj3S 4kj4RContact Map
4kj54kj5S 4kj6R 4kj7S 4kj8R 4kj9S 4kjaR 4kjbS 4kjcRContact Map
3ohc3ohcR 3ohdR 3ohjW 3ohkWContact Map
3knh3knhR 3kniW 3knjR 3knkWContact Map
3uz63uz6U 3uz7U 3uz8S 3uz9SContact Map
3oge3ogeR 3ogyR 3oh5W 3oh7WContact Map
3uyd3uydU 3uyeS 3uyfU 3uygSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
75_Y 36_N 0.88 0.01
19_L 20_A 0.85 0.00
43_G 29_F 0.84 0.00
2_E 81_F 0.82 0.00
74_A 48_G 0.81 0.00
97_K 21_K 0.77 0.00
28_S 81_F 0.77 0.00
29_L 81_F 0.76 0.00
85_V 47_T 0.76 0.00
38_Y 18_R 0.70 0.00
29_L 51_L 0.69 0.00
35_I 84_K 0.68 0.00
24_I 82_T 0.68 0.00
65_L 64_R 0.67 0.00
95_I 32_R 0.66 0.00
59_V 46_E 0.66 0.00
71_V 72_R 0.65 0.00
28_S 21_K 0.65 0.00
101_S 38_E 0.65 0.00
18_R 76_L 0.65 0.00
90_R 47_T 0.63 0.00
89_A 45_S 0.63 0.00
78_E 70_I 0.62 0.00
63_D 77_G 0.62 0.00
90_R 70_I 0.62 0.00
23_L 80_P 0.62 0.00
4_K 67_A 0.62 0.00
103_I 79_L 0.61 0.00
35_I 82_T 0.61 0.00
105_V 50_I 0.61 0.00
93_A 77_G 0.60 0.00
108_G 77_G 0.59 0.00
90_R 42_R 0.59 0.00
13_S 46_E 0.58 0.00
18_R 65_I 0.58 0.00
73_A 31_L 0.58 0.00
3_A 59_S 0.58 0.00
65_L 84_K 0.58 0.00
25_R 64_R 0.57 0.00
63_D 56_T 0.57 0.00
27_K 82_T 0.57 0.00
24_I 27_G 0.56 0.00
106_I 47_T 0.56 0.00
40_N 53_R 0.56 0.00
90_R 73_A 0.56 0.00
63_D 18_R 0.56 0.00
38_Y 43_F 0.55 0.00
14_P 23_K 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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