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OPENSEQ.org
L22 - L30
UniProt: Q5SHP3 - Q5SHQ6
Length: 173
Sequences: 927
Seq/Len: 5.42
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoRWContact Map
1vq81vq8RWContact Map
1vqp1vqpRWContact Map
1vqm1vqmRWContact Map
1vql1vqlRWContact Map
1vqk1vqkRWContact Map
1yhq1yhqRWContact Map
1s721s72RWContact Map
1vq91vq9RWContact Map
1vqn1vqnRWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_R 19_Q 0.94 0.01
66_E 47_V 0.80 0.01
93_A 58_V 0.72 0.01
111_H 60_E 0.71 0.01
105_V 17_K 0.70 0.01
87_P 1_M 0.65 0.01
12_I 8_L 0.65 0.01
97_K 42_A 0.64 0.01
63_D 11_S 0.64 0.01
94_D 48_E 0.62 0.00
108_G 6_V 0.62 0.00
65_L 25_A 0.61 0.00
45_Y 56_V 0.61 0.00
107_L 46_N 0.60 0.00
95_I 8_L 0.58 0.00
90_R 52_H 0.57 0.00
6_I 53_L 0.57 0.00
24_I 12_P 0.57 0.00
83_K 18_D 0.56 0.00
24_I 50_V 0.56 0.00
40_N 5_K 0.56 0.00
77_D 24_K 0.55 0.00
83_K 13_I 0.55 0.00
82_L 17_K 0.55 0.00
110_K 8_L 0.55 0.00
103_I 8_L 0.54 0.00
55_A 26_L 0.54 0.00
46_F 8_L 0.54 0.00
82_L 38_E 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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