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OPENSEQ.org
L22 - L29
UniProt: Q5SHP3 - Q5SHP6
Length: 185
Sequences: 1058
Seq/Len: 6.05
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoRVContact Map
1vq81vq8RVContact Map
1vqp1vqpRVContact Map
1vqm1vqmRVContact Map
1vql1vqlRVContact Map
1vqk1vqkRVContact Map
1yhq1yhqRVContact Map
1s721s72RVContact Map
1vq91vq9RVContact Map
1vqn1vqnRVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
73_A 55_R 0.73 0.00
101_S 31_E 0.73 0.00
24_I 52_D 0.71 0.00
14_P 29_K 0.69 0.00
39_T 61_L 0.69 0.00
42_R 55_R 0.67 0.00
107_L 70_Q 0.67 0.00
70_Y 37_F 0.65 0.00
6_I 65_N 0.64 0.00
25_R 42_G 0.63 0.00
6_I 57_I 0.61 0.00
111_H 23_K 0.60 0.00
20_V 59_R 0.60 0.00
64_M 35_L 0.60 0.00
87_P 12_E 0.59 0.00
27_K 54_K 0.59 0.00
55_A 14_R 0.59 0.00
60_N 43_Q 0.58 0.00
35_I 38_Q 0.58 0.00
47_V 50_I 0.58 0.00
4_K 46_Q 0.58 0.00
61_N 46_Q 0.58 0.00
10_V 42_G 0.58 0.00
27_K 46_Q 0.57 0.00
18_R 26_R 0.57 0.00
24_I 30_R 0.57 0.00
92_R 67_K 0.56 0.00
40_N 50_I 0.56 0.00
78_E 43_Q 0.54 0.00
74_A 29_K 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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