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OPENSEQ.org
L22 - S20
UniProt: Q5SHP3 - P80380
Length: 219
Sequences: 1187
Seq/Len: 6.03
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2dW 3v2eT 3v2fWContact Map
2j002j00T 2j01W 2j02T 2j03WContact Map
4juw4juwT 4juxWContact Map
4kix4kixS 4kiyT 4kizS 4kj0T 4kj1S 4kj2T 4kj3S 4kj4TContact Map
4kj54kj5S 4kj6T 4kj7S 4kj8T 4kj9S 4kjaT 4kjbS 4kjcTContact Map
3knh3knhT 3kniW 3knjT 3knkWContact Map
3ohc3ohcT 3ohdT 3ohjW 3ohkWContact Map
3uz63uz6W 3uz7W 3uz8S 3uz9SContact Map
3oge3ogeT 3ogyT 3oh5W 3oh7WContact Map
3uyd3uydW 3uyeS 3uyfW 3uygSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_K 69_G 0.91 0.01
101_S 9_N 0.74 0.01
83_K 43_L 0.71 0.01
94_D 81_K 0.69 0.00
103_I 15_R 0.68 0.00
107_L 86_R 0.66 0.00
51_L 75_N 0.66 0.00
18_R 81_K 0.66 0.00
95_I 8_R 0.65 0.00
17_V 51_E 0.65 0.00
81_A 82_S 0.64 0.00
19_L 79_R 0.63 0.00
61_N 80_R 0.63 0.00
89_A 35_T 0.62 0.00
18_R 64_D 0.61 0.00
81_A 89_R 0.61 0.00
27_K 89_R 0.61 0.00
25_R 41_I 0.60 0.00
4_K 32_A 0.60 0.00
9_Y 24_L 0.60 0.00
40_N 11_S 0.59 0.00
106_I 67_A 0.59 0.00
65_L 41_I 0.58 0.00
13_S 14_K 0.58 0.00
108_G 55_I 0.58 0.00
109_E 80_R 0.57 0.00
105_V 33_I 0.56 0.00
7_A 16_H 0.56 0.00
60_N 75_N 0.56 0.00
49_K 36_L 0.56 0.00
46_F 78_A 0.56 0.00
80_P 25_R 0.56 0.00
76_V 17_R 0.55 0.00
8_R 87_K 0.55 0.00
74_A 42_Q 0.55 0.00
98_K 44_A 0.54 0.00
29_L 61_S 0.54 0.00
93_A 11_S 0.54 0.00
8_R 57_R 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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