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OPENSEQ.org
L22 - S13
UniProt: Q5SHP3 - P80377
Length: 239
Sequences: 1370
Seq/Len: 5.86
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2dW 3v2eM 3v2fWContact Map
2j002j00M 2j01W 2j02M 2j03WContact Map
4juw4juwM 4juxWContact Map
4kix4kixS 4kiyM 4kizS 4kj0M 4kj1S 4kj2M 4kj3S 4kj4MContact Map
4kj54kj5S 4kj6M 4kj7S 4kj8M 4kj9S 4kjaM 4kjbS 4kjcMContact Map
3knh3knhM 3kniW 3knjM 3knkWContact Map
3ohc3ohcM 3ohdM 3ohjW 3ohkWContact Map
3uz63uz6P 3uz7P 3uz8S 3uz9SContact Map
3u5b3u5cS 3u5eP 3u5gS 3u5iPContact Map
3oge3ogeM 3ogyM 3oh5W 3oh7WContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_P 82_M 0.83 0.00
108_G 25_I 0.80 0.00
44_A 73_E 0.77 0.00
73_A 30_A 0.76 0.00
78_E 30_A 0.73 0.00
3_A 18_A 0.72 0.00
29_L 51_A 0.71 0.00
1_M 50_E 0.71 0.00
47_V 47_D 0.69 0.00
95_I 122_K 0.69 0.00
101_S 44_R 0.68 0.00
46_F 114_R 0.67 0.00
58_A 48_L 0.67 0.00
74_A 119_G 0.66 0.00
27_K 104_R 0.66 0.00
95_I 119_G 0.66 0.00
66_E 84_I 0.65 0.00
89_A 48_L 0.64 0.00
68_R 56_L 0.63 0.00
28_S 54_V 0.63 0.00
43_G 78_I 0.63 0.00
65_L 83_D 0.63 0.00
5_A 96_L 0.63 0.00
60_N 117_V 0.61 0.00
67_D 114_R 0.61 0.00
45_Y 12_N 0.61 0.00
45_Y 51_A 0.60 0.00
19_L 9_I 0.60 0.00
43_G 11_R 0.60 0.00
54_A 97_P 0.59 0.00
67_D 113_P 0.59 0.00
82_L 30_A 0.59 0.00
38_Y 114_R 0.59 0.00
65_L 76_A 0.58 0.00
100_T 39_I 0.58 0.00
84_R 67_E 0.58 0.00
103_I 64_W 0.58 0.00
22_D 60_V 0.58 0.00
71_V 62_N 0.57 0.00
72_K 74_V 0.57 0.00
101_S 72_A 0.57 0.00
92_R 5_A 0.57 0.00
55_A 30_A 0.57 0.00
2_E 119_G 0.56 0.00
102_H 9_I 0.56 0.00
105_V 71_R 0.56 0.00
97_K 49_T 0.56 0.00
16_K 106_N 0.56 0.00
31_E 52_E 0.55 0.00
24_I 77_N 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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