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OPENSEQ.org
L22 - S11
UniProt: Q5SHP3 - P80376
Length: 242
Sequences: 1281
Seq/Len: 5.38
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2dW 3v2eK 3v2fWContact Map
2j002j00K 2j01W 2j02K 2j03WContact Map
4juw4juwK 4juxWContact Map
4kix4kixS 4kiyK 4kizS 4kj0K 4kj1S 4kj2K 4kj3S 4kj4KContact Map
4kj54kj5S 4kj6K 4kj7S 4kj8K 4kj9S 4kjaK 4kjbS 4kjcKContact Map
3ohc3ohcK 3ohdK 3ohjW 3ohkWContact Map
3knh3knhK 3kniW 3knjK 3knkWContact Map
3uz63uz6N 3uz7N 3uz8S 3uz9SContact Map
3u5b3u5cO 3u5eP 3u5gO 3u5iPContact Map
3oge3ogeK 3ogyK 3oh5W 3oh7WContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
51_L 2_A 0.90 0.01
93_A 21_I 0.86 0.01
66_E 59_Y 0.85 0.01
89_A 18_R 0.84 0.01
62_H 7_K 0.83 0.01
35_I 85_R 0.81 0.01
44_A 114_V 0.78 0.00
88_R 66_L 0.76 0.00
80_P 30_V 0.75 0.00
83_K 116_H 0.73 0.00
87_P 21_I 0.73 0.00
31_E 4_K 0.72 0.00
106_I 9_K 0.72 0.00
20_V 40_I 0.72 0.00
27_K 63_L 0.71 0.00
76_V 3_K 0.70 0.00
43_G 16_S 0.70 0.00
94_D 30_V 0.69 0.00
37_R 24_S 0.69 0.00
62_H 1_M 0.69 0.00
83_K 33_T 0.68 0.00
102_H 59_Y 0.68 0.00
30_E 107_S 0.67 0.00
97_K 115_P 0.67 0.00
108_G 114_V 0.66 0.00
31_E 81_D 0.65 0.00
90_R 67_D 0.64 0.00
102_H 30_V 0.64 0.00
92_R 29_I 0.63 0.00
90_R 79_S 0.63 0.00
88_R 28_T 0.63 0.00
88_R 11_K 0.63 0.00
58_A 28_T 0.62 0.00
105_V 77_M 0.62 0.00
49_K 19_A 0.62 0.00
98_K 118_G 0.62 0.00
82_L 32_I 0.61 0.00
10_V 44_S 0.61 0.00
81_A 85_R 0.61 0.00
98_K 54_R 0.61 0.00
90_R 18_R 0.60 0.00
73_A 2_A 0.60 0.00
38_Y 92_E 0.60 0.00
97_K 3_K 0.60 0.00
13_S 45_G 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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