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OPENSEQ.org
L22 - S04
UniProt: Q5SHP3 - P80373
Length: 322
Sequences: 1254
Seq/Len: 3.93
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cD 3v2dW 3v2eD 3v2fWContact Map
2j002j00D 2j01W 2j02D 2j03WContact Map
4juw4juwD 4juxWContact Map
4kix4kixS 4kiyD 4kizS 4kj0D 4kj1S 4kj2D 4kj3S 4kj4DContact Map
4kj54kj5S 4kj6D 4kj7S 4kj8D 4kj9S 4kjaD 4kjbS 4kjcDContact Map
3ohc3ohcD 3ohdD 3ohjW 3ohkWContact Map
3knh3knhD 3kniW 3knjD 3knkWContact Map
3uz63uz6G 3uz7G 3uz8S 3uz9SContact Map
3u5b3u5cJ 3u5eP 3u5gJ 3u5iPContact Map
3oge3ogeD 3ogyD 3oh5W 3oh7WContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
90_R 46_K 0.84 0.00
47_V 122_R 0.81 0.00
49_K 204_I 0.81 0.00
75_Y 138_Y 0.77 0.00
51_L 124_G 0.76 0.00
20_V 145_E 0.74 0.00
35_I 111_A 0.72 0.00
37_R 126_I 0.71 0.00
92_R 207_Y 0.69 0.00
92_R 174_L 0.69 0.00
73_A 153_R 0.67 0.00
49_K 163_E 0.66 0.00
20_V 32_A 0.66 0.00
71_V 84_K 0.66 0.00
34_N 55_A 0.66 0.00
109_E 51_P 0.66 0.00
82_L 92_V 0.66 0.00
4_K 153_R 0.66 0.00
66_E 10_R 0.64 0.00
50_V 52_S 0.63 0.00
74_A 57_R 0.63 0.00
37_R 91_S 0.63 0.00
109_E 18_K 0.63 0.00
86_L 153_R 0.62 0.00
30_E 141_R 0.62 0.00
55_A 47_R 0.61 0.00
110_K 183_G 0.60 0.00
45_Y 174_L 0.60 0.00
10_V 78_L 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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