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OPENSEQ.org
L22 - L34
UniProt: Q5SHP3 - P80340
Length: 162
Sequences: 873
Seq/Len: 5.60
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dW7 3v2fW7Contact Map
2j002j01W7 2j03W7Contact Map
4juw4juxW7Contact Map
4kix4kixS2 4kizS2 4kj1S2 4kj3S2Contact Map
4kj54kj5S2 4kj7S2 4kj9S2 4kjbS2Contact Map
2zjr2zjrP2Contact Map
4btc4btdW7Contact Map
3uyd3uyeS7 3uygS7Contact Map
4gd13r8sS2 3r8tS2Contact Map
3ohc3ohjW7 3ohkW7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
108_G 23_R 0.90 0.01
89_A 14_K 0.87 0.01
18_R 15_T 0.75 0.00
55_A 1_M 0.74 0.00
48_A 25_P 0.71 0.00
85_V 33_R 0.70 0.00
88_R 14_K 0.69 0.00
105_V 2_K 0.68 0.00
77_D 10_R 0.68 0.00
81_A 44_P 0.66 0.00
50_V 43_T 0.64 0.00
95_I 12_R 0.64 0.00
60_N 11_K 0.63 0.00
107_L 4_T 0.62 0.00
97_K 9_R 0.62 0.00
25_R 21_R 0.61 0.00
22_D 22_M 0.61 0.00
94_D 33_R 0.60 0.00
28_S 11_K 0.60 0.00
77_D 11_K 0.60 0.00
19_L 23_R 0.60 0.00
18_R 11_K 0.59 0.00
38_Y 3_R 0.59 0.00
68_R 25_P 0.58 0.00
45_Y 31_L 0.57 0.00
87_P 25_P 0.57 0.00
58_A 14_K 0.56 0.00
75_Y 26_G 0.55 0.00
4_K 31_L 0.55 0.00
15_R 1_M 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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